diff --git a/BioArchLinux/r-digest/PKGBUILD b/BioArchLinux/r-digest/PKGBUILD index babc758d5a..c4238ad2d1 100644 --- a/BioArchLinux/r-digest/PKGBUILD +++ b/BioArchLinux/r-digest/PKGBUILD @@ -1,33 +1,61 @@ -# Maintainer: Guoyi Zhang +# Maintainer: Pekka Ristola +# Contributor: Guoyi Zhang # Contributor: Viktor Drobot (aka dviktor) linux776 [at] gmail [dot] com # Contributor: frichtlm # Contributor: Grey Christoforo +# Contributor: Alex Branham +# Contributor: Nick B +# Contributor: Francois Garillot _pkgname=digest _pkgver=0.6.33 pkgname=r-${_pkgname,,} -pkgver=0.6.33 +pkgver=${_pkgver//-/.} pkgrel=1 -pkgdesc='Create Compact Hash Digests of R Objects' -arch=('x86_64') +pkgdesc="Create Compact Hash Digests of R Objects" +arch=(x86_64) url="https://cran.r-project.org/package=${_pkgname}" -license=('GPL') +license=(GPL) depends=( + google-crc32c + libblake3 r + xxhash + zlib +) +checkdepends=( + r-tinytest ) optdepends=( r-simplermarkdown r-tinytest ) source=("https://cran.r-project.org/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +md5sums=('f47359e9e90e279714c9fd50a47ad2ed') sha256sums=('be702c886b1639be7eda4ea25a4261b30ce418c580f79bd78ec8d6cb4d327819') +prepare() { + cd "$_pkgname/src" + # use system blake3, crc32c, xxhash and zlib + rm -r crc32c + rm blake3* crc32.* crc32c* xxhash.* z* + sed -i 's/digest_crc32/crc32/' digest.c + sed -e 's|PKG_CPPFLAGS = -I.|PKG_CPPFLAGS = -I/usr/include/crc32c -I.|' \ + -e '2 a PKG_LIBS = -lblake3 -lcrc32c -lxxhash -lz' \ + -i Makevars +} + build() { - R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" + mkdir -p build + R CMD INSTALL "$_pkgname" -l build +} + +check() { + cd "$_pkgname/tests" + R_LIBS="$srcdir/build" Rscript --vanilla tinytest.R } package() { - install -dm0755 "${pkgdir}/usr/lib/R/library" - cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" + install -d "$pkgdir/usr/lib/R/library" + cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library" } -# vim:set ts=2 sw=2 et: diff --git a/BioArchLinux/r-digest/lilac.py b/BioArchLinux/r-digest/lilac.py index bd219c037c..b5cdb057c5 100644 --- a/BioArchLinux/r-digest/lilac.py +++ b/BioArchLinux/r-digest/lilac.py @@ -1,12 +1,13 @@ #!/usr/bin/env python3 from lilaclib import * +import os +import sys +sys.path.append(os.path.normpath(f'{__file__}/../../../lilac-extensions')) +from lilac_r_utils import r_pre_build + def pre_build(): - for line in edit_file('PKGBUILD'): - if line.startswith('_pkgver='): - line = f'_pkgver={_G.newver}' - print(line) - update_pkgver_and_pkgrel(_G.newver.replace(':', '.').replace('-', '.')) + r_pre_build(_G) def post_build(): git_pkgbuild_commit() diff --git a/BioArchLinux/r-digest/lilac.yaml b/BioArchLinux/r-digest/lilac.yaml index 26792b25ee..7aa4a3deed 100644 --- a/BioArchLinux/r-digest/lilac.yaml +++ b/BioArchLinux/r-digest/lilac.yaml @@ -1,9 +1,25 @@ build_prefix: extra-x86_64 maintainers: -- github: starsareintherose - email: kuoi@bioarchlinux.org +- github: pekkarr + email: pekkarr@protonmail.com +repo_depends: +- google-crc32c +- libblake3 +repo_makedepends: +- r-tinytest update_on: -- regex: digest_([\d._-]+).tar.gz - source: regex - url: https://cran.r-project.org/package=digest +- source: rpkgs + pkgname: digest + repo: cran + md5: true - alias: r +- source: alpm + alpm: xxhash + repo: extra + provided: libxxhash.so + strip_release: true +- source: alpm + alpm: zlib + repo: core + provided: libz.so + strip_release: true