Add lra

BioArchLinux/lra/PKGBUILD

@@ -0,0 +1,26 @@
+# Maintainer:  Mick Elliot <m.g.elliot@rug.nl>
+# Contributor: Mick Elliot <m.g.elliot@rug.nl>
+
+pkgname=lra
+pkgver=1.3.2
+pkgrel=1
+pkgdesc='A long read aligner for sequences and contigs. doi:10.1371/journal.pcbi.1009078'
+arch=('x86_64')
+url="https://github.com/ChaissonLab/${pkgname^^}"
+license=('USC-RL v1.0')
+depends=('zlib' 'htslib')
+provides=('lra')
+source=("${pkgver}.tar.gz::${url}/archive/refs/tags/${pkgver}.tar.gz")
+sha256sums=('a0ec18d4bd2bc196eb4063ad45fcdb306f212feddca6a7aca8ef87122a0cca1f')
+
+build() {
+  cd "${pkgname^^}-${pkgver}"
+  make
+}
+
+package() {
+  cd "${pkgname^^}-${pkgver}"
+  install -Dm644 LICENSE.txt "${pkgdir}/usr/share/licenses/${pkgname}/LICENSE"
+  install -Dm644 lra "${pkgdir}/usr/bin/${pkgname}"
+  chmod +x "${pkgdir}/usr/bin/${pkgname}"
+}

BioArchLinux/lra/lilac.py

@@ -0,0 +1,11 @@
+#!/usr/bin/env python3
+
+from lilaclib import *
+
+def pre_build():
+  update_pkgver_and_pkgrel(_G.newver.lstrip('v'))
+
+def post_build():
+  git_add_files('PKGBUILD')
+  git_commit()
+

BioArchLinux/lra/lilac.yaml

@@ -0,0 +1,9 @@
+build_prefix: extra-x86_64
+maintainers:
+  - github: michaelgelliot
+    email: m.g.elliot@rug.nl
+update_on:
+  - source: github
+    github: ChaissonLab/LRA
+    use_max_tag: true
+