*: clean git pkg and rm py

BioArchLinux/archrepo2/PKGBUILD

@@ -18,7 +18,7 @@ _gitroot=archrepo2
 
 pkgver() {
   cd "$srcdir/$_gitroot"
-  git describe | sed -E 's/([^-]*-g)/r\1/;s/-/./g;s/v//'
+  printf $(TZ=UTC git log --no-walk --tags --pretty="%cd" --decorate=full --date=format-local:%Y.%m.%d | head -n 1)
 }
 
 build() {

BioArchLinux/archrepo2/lilac.py

@@ -1,9 +0,0 @@
-from lilaclib import *
-
-def pre_build():
-  update_pkgrel()
-  vcs_update()
-
-def post_build():
-  git_add_files('PKGBUILD')
-  git_commit()

BioArchLinux/archrepo2/lilac.yaml

@@ -1,6 +1,10 @@
 maintainers:
 - github: starsareintherose
   email: kuoi@bioarchlinux.org
+post_build_script: |
+  git_add_files('PKGBUILD')
+  git_pkgbuild_commit()
+  git_commit()
 update_on:
 - source: github
   github: lilydjwg/archrepo2

BioArchLinux/bioarchlinux-keyring/PKGBUILD

@@ -11,7 +11,8 @@ license=('GPL')
 source=('git+https://github.com/BioArchLinux/keyring.git')
 sha256sums=('SKIP')
 pkgver(){
-  date +%Y%m%d
+  cd "${srcdir}"/keyring
+  printf $(TZ=UTC git log --no-walk --pretty="%cd" --decorate=full --date=format-local:%Y.%m.%d | head -n 1)
 }
 package() {
   cd "${srcdir}"/keyring

BioArchLinux/bioarchlinux-mirrorlist/PKGBUILD

@@ -11,7 +11,8 @@ backup=(etc/pacman.d/mirrorlist.bio)
 source=(https://raw.githubusercontent.com/BioArchLinux/mirror/main/mirrorlist.bio)
 sha256sums=('8a90984620549313c521f12b8b4dea49275af9056959d966973f97a97ce41c63')
 pkgver(){
-  date +%Y%m%d
+  cd $srcdir/mirror
+  printf $(TZ=UTC git log --no-walk --pretty="%cd" --decorate=full --date=format-local:%Y.%m.%d | head -n 1)
 }
 package() {
   mkdir -p "$pkgdir/etc/pacman.d"

BioArchLinux/bioarchlinux-mirrorlist/lilac.py

@@ -1,10 +0,0 @@
-#!/usr/bin/env python3
-from lilaclib import *
-
-def pre_build():
-    update_pkgver_and_pkgrel(_G.newver.lstrip('v'))
-    run_cmd(['updpkgsums'])
-
-def post_build():
-    git_add_files('PKGBUILD')
-    git_commit()

BioArchLinux/bioarchlinux-mirrorlist/lilac.yaml

@@ -2,8 +2,10 @@ build_prefix: extra-x86_64
 maintainers:
   - github: starsareintherose
     email: kuoi@bioarchlinux.org
-pre_build: vcs_update
-post_build: git_pkgbuild_commit
+post_build_script: |
+  git_add_files('PKGBUILD')
+  git_pkgbuild_commit()
+  git_commit()
 update_on:
   - source: github
     github: BioArchLinux/mirror

BioArchLinux/bioarchlinux-packages/PKGBUILD

@@ -16,7 +16,7 @@ sha256sums=('SKIP'
             'dd2a46ad3b1e7d532b53f10ced77fbd74924c8635ff3778d62a42f0606295d2c')
 pkgver() {
   cd "$pkgname"
-  printf "r%s.%s" "$(git rev-list --count HEAD)" "$(git rev-parse --short HEAD)"
+  printf $(TZ=UTC git log --no-walk --pretty="%cd" --decorate=full --date=format-local:%Y.%m.%d | head -n 1)
 }
 build() {
   cd "$pkgname"/src

BioArchLinux/bioarchlinux-packages/lilac.yaml

@@ -2,11 +2,10 @@ maintainers:
   - github: starsareintherose
     email: kuoi@bioarchlinux.org
 build_prefix: extra-x86_64
-pre_build_script: |
-    update_pkgrel()
-    vcs_update()
 post_build_script: |
+  git_add_files('PKGBUILD')
   git_pkgbuild_commit()
+  git_commit()
 update_on:
   - source: github
     github: BioArchLinux/bioarchlinux-packages

BioArchLinux/bioawk/PKGBUILD

@@ -12,6 +12,10 @@ conflicts=("bioawk")
 makedepends=('bison' 'make' 'gcc' 'git')
 source=("git+https://github.com/lh3/bioawk.git")
 md5sums=('SKIP')
+pkgver(){
+  cd $srcdir/bioawk
+  printf $(TZ=UTC git log --no-walk --pretty="%cd" --decorate=full --date=format-local:%Y.%m.%d | head -n 1)
+}
 
 prepare() {
   cd "$srcdir/bioawk"

BioArchLinux/bioawk/lilac.py

@@ -1,10 +0,0 @@
-#!/usr/bin/env python3
-from lilaclib import *
-
-def pre_build():
-    update_pkgver_and_pkgrel(_G.newver.lstrip('v'))
-    run_cmd(['updpkgsums'])
-
-def post_build():
-    git_add_files('PKGBUILD')
-    git_commit()

BioArchLinux/bioawk/lilac.yaml

@@ -2,11 +2,10 @@ build_prefix: extra-x86_64
 maintainers:
   - github: starsareintherose
     email: starsareintherose@outlook.com
-pre_build_script: |
-    update_pkgrel()
-    vcs_update()
 post_build_script: |
+  git_add_files('PKGBUILD')
   git_pkgbuild_commit()
+  git_commit()
 update_on:
   - source: github
     github: lh3/bioawk

BioArchLinux/cdbfasta/PKGBUILD

@@ -14,8 +14,7 @@ md5sums=('SKIP')
 
 pkgver() {
 	cd "$srcdir/${pkgname}"
-	# Git, no tags available
-	printf "r%s.%s" "$(git rev-list --count HEAD)" "$(git rev-parse --short HEAD)"
+	printf $(TZ=UTC git log --no-walk --pretty="%cd" --decorate=full --date=format-local:%Y.%m.%d | head -n 1)
 }
 
 build() {

BioArchLinux/cdbfasta/lilac.yaml

@@ -2,9 +2,6 @@ build_prefix: extra-x86_64
 maintainers:
   - github: github.com/kbipinkumar
     email: bipin@ccmb.res.in
-pre_build_script: |
-  update_pkgver_and_pkgrel(_G.newver.lstrip('v'))
-  vcs_update()
 post_build_script: |
   git_add_files('PKGBUILD')
   git_pkgbuild_commit()

BioArchLinux/devtools-bio/PKGBUILD

@@ -14,8 +14,7 @@ sha256sums=('SKIP')
 
 pkgver() {
   cd "$srcdir/devtools-bio"
-
-  echo "$(git rev-list --count master).$(git rev-parse --short master)"
+  printf $(TZ=UTC git log --no-walk --pretty="%cd" --decorate=full --date=format-local:%Y.%m.%d | head -n 1)
 }
 
 build() {

BioArchLinux/devtools-bio/lilac.py

@@ -1,10 +0,0 @@
-#!/usr/bin/env python3
-from lilaclib import *
-
-def pre_build():
-    update_pkgver_and_pkgrel(_G.newver.lstrip('v'))
-    run_cmd(['updpkgsums'])
-
-def post_build():
-    git_add_files('PKGBUILD')
-    git_commit()

BioArchLinux/devtools-bio/lilac.yaml

@@ -2,8 +2,10 @@ build_prefix: extra-x86_64
 maintainers:
   - github: starsareintherose
     email: kuoi@bioarchlinux.org
-pre_build: vcs_update
-post_build: git_pkgbuild_commit
+post_build_script: |
+  git_add_files('PKGBUILD')
+  git_pkgbuild_commit()
+  git_commit() 
 update_on:
   - source: github
     github: BioArchLinux/devtools-bio

BioArchLinux/ev-view/lilac.yaml

@@ -2,13 +2,10 @@ maintainers:
   - github: starsareintherose
     email: kuoi@bioarchlinux.org
 build_prefix: extra-x86_64
-pre_build_script: |
-    update_pkgrel()
-    vcs_update()
-    update_pkgver_and_pkgrel(_G.newver.lstrip('v'))
-    run_cmd(['updpkgsums'])
 post_build_script: |
+  git_add_files('PKGBUILD')
   git_pkgbuild_commit()
+  git_commit()
   update_aur_repo() 
 update_on:
   - source: github

BioArchLinux/evs/lilac.yaml

@@ -2,13 +2,10 @@ maintainers:
   - github: starsareintherose
     email: kuoi@bioarchlinux.org
 build_prefix: extra-x86_64
-pre_build_script: |
-    update_pkgrel()
-    vcs_update()
-    update_pkgver_and_pkgrel(_G.newver.lstrip('v'))
-    run_cmd(['updpkgsums'])
 post_build_script: |
+  git_add_files('PKGBUILD')
   git_pkgbuild_commit()
+  git_commit()
   update_aur_repo() 
 update_on:
   - source: github

BioArchLinux/fasta/lilac.py

@@ -1,10 +0,0 @@
-#!/usr/bin/env python3
-from lilaclib import *
-
-def pre_build():
-    update_pkgver_and_pkgrel(_G.newver.lstrip('v'))
-    run_cmd(['updpkgsums'])
-
-def post_build():
-    git_add_files('PKGBUILD')
-    git_commit()

BioArchLinux/fasta/lilac.yaml

@@ -2,8 +2,12 @@ build_prefix: multilib
 maintainers:
   - github: starsareintherose
     email: kuoi@bioarchlinux.org
-pre_build: vcs_update
-post_build: git_pkgbuild_commit
+pre_build_script: |
+  update_pkgver_and_pkgrel(_G.newver.lstrip('v'))
+  run_cmd(['updpkgsums'])
+post_build_script: |
+  git_add_files('PKGBUILD')
+  git_commit()
 update_on:
   - source: cmd
     cmd: curl -sS https://raw.githubusercontent.com/wrpearson/fasta36/v36.3.8/README.md | grep 'Changes in' | sed 's/-/ /g' | sed 's/\*\* /_/g' | sed 's/, /_/g' | head -n 1 | awk '{print $4}'

BioArchLinux/fasta_ushuffle/lilac.py

@@ -1,10 +0,0 @@
-#!/usr/bin/env python3
-
-from lilaclib import *
-
-def pre_build():
-  update_pkgver_and_pkgrel(_G.newver.lstrip('v'))
-
-def post_build():
-  git_add_files('PKGBUILD')
-  git_commit()

BioArchLinux/fasta_ushuffle/lilac.yaml

@@ -2,8 +2,12 @@ build_prefix: multilib
 maintainers:
   - github: starsareintherose
     email: kuoi@bioarchlinux.org
-pre_build: vcs_update
-post_build: git_pkgbuild_commit
+pre_build_script: |
+  update_pkgver_and_pkgrel(_G.newver.lstrip('v'))
+  run_cmd(['updpkgsums'])
+post_build_script: |
+  git_add_files('PKGBUILD')
+  git_commit()
 update_on:
   - source: cmd
     cmd: curl -sS https://raw.githubusercontent.com/agordon/fasta_ushuffle/master/README | grep 'VERSION' | awk '{print $2}'

BioArchLinux/garli/lilac.py

@@ -1,11 +0,0 @@
-#!/usr/bin/env python3
-
-from lilaclib import *
-
-def pre_build():
-  update_pkgver_and_pkgrel(_G.newver.lstrip('v'))
-  run_cmd(['updpkgsums'])
-
-def post_build():
-  git_add_files('PKGBUILD')
-  git_commit()

BioArchLinux/garli/lilac.yaml

@@ -3,10 +3,12 @@ maintainers:
   - github: starsareintherose
     email: kuoi@bioarchlinux.org
 pre_build_script: |
-    update_pkgrel()
-    vcs_update()
+  update_pkgver_and_pkgrel(_G.newver.lstrip('v'))
+  run_cmd(['updpkgsums'])
 post_build_script: |
-    git_pkgbuild_commit()
+  git_add_files('PKGBUILD')
+  git_commit()
+  update_aur_repo()
 update_on:
   - source: cmd
     cmd: curl -sS https://github.com/zwickl/garli/tree/master/garli/tags | grep 'href="/zwickl/garli/tree/master/garli/tags' | grep '\-release' | sed 's/<span class="css-truncate css-truncate-target d-block width-fit"><a class="js-navigation-open Link--primary" title="/ /g' | sed 's/-release/ /g' | awk '{print $1}' | sort -r | head -n 1

BioArchLinux/lilac/lilac.yaml

@@ -5,7 +5,6 @@ build_prefix: extra-x86_64
 pre_build_script: |
   update_pkgver_and_pkgrel(_G.newver.lstrip('v'))
   run_cmd(['updpkgsums'])
-  vcs_update()
 post_build_script: |
   git_add_files('PKGBUILD')
   git_pkgbuild_commit()

BioArchLinux/mcscanx/PKGBUILD

@@ -15,7 +15,7 @@ source=(git+https://github.com/wyp1125/MCScanX.git)
 sha256sums=('SKIP')
 pkgver(){
   cd $_pkgname
-  printf "r%s.%s" "$(git rev-list --count HEAD)" "$(git rev-parse --short HEAD)"
+  printf $(TZ=UTC git log --no-walk --pretty="%cd" --decorate=full --date=format-local:%Y.%m.%d | head -n 1)
 }
 
 build() {

BioArchLinux/mcscanx/lilac.yaml

@@ -5,7 +5,6 @@ build_prefix: extra-x86_64
 pre_build_script: |
   update_pkgver_and_pkgrel(_G.newver.lstrip('v'))
   run_cmd(['updpkgsums'])
-  vcs_update()
 post_build_script: |
   git_add_files('PKGBUILD')
   git_commit()

BioArchLinux/mediawiki-extensions-mobilefrontend/lilac.py

@@ -1,10 +0,0 @@
-#!/usr/bin/env python3
-from lilaclib import *
-
-def pre_build():
-    update_pkgver_and_pkgrel(_G.newver.lstrip('v'))
-    run_cmd(['updpkgsums'])
-
-def post_build():
-    git_add_files('PKGBUILD')
-    git_commit()

BioArchLinux/mediawiki-extensions-mobilefrontend/lilac.yaml

@@ -2,8 +2,12 @@ build_prefix: multilib
 maintainers:
   - github: starsareintherose
     email: kuoi@bioarchlinux.org
-pre_build: vcs_update
-post_build: git_pkgbuild_commit
+pre_build_script: |
+  update_pkgver_and_pkgrel(_G.newver.lstrip('v'))
+  run_cmd(['updpkgsums'])
+post_build_script: |
+  git_add_files('PKGBUILD')
+  git_commit()
 update_on:
   - source: cmd
     cmd: curl -sS https://raw.githubusercontent.com/archlinux/svntogit-community/packages/mediawiki/trunk/PKGBUILD | grep 'pkgver=' | sed 's/=/ /g' | awk '{print $2}' | cut -f 1,2 -d"." | sed 's/\./_/g'

BioArchLinux/mpi-bucky/lilac.yaml

@@ -2,11 +2,11 @@ build_prefix: extra-x86_64
 maintainers:
   - github: starsareintherose
     email: kuoi@bioarchlinux.org
-pre_build_script: |
-    update_pkgrel()
-    vcs_update()
 post_build_script: |
+  git_add_files('PKGBUILD')
+  git_commit()
   git_pkgbuild_commit()
+  update_aur_repo()
 update_on:
   - source: cmd
     cmd: curl -sS https://raw.githubusercontent.com/tkchafin/mpi-bucky/master/src/bucky.C | grep ' BUCKy' | awk '{print $3}'

BioArchLinux/popart/PKGBUILD

@@ -12,6 +12,10 @@ makedepends=('git')
 source=("git+https://github.com/jessicawleigh/popart-current.git" "popart.desktop")
 md5sums=('SKIP'
          '44802b43fa5dba142dbb20cc32e15f45')
+pkgver(){
+  cd $srcdir/${pkgname}-current
+  printf $(TZ=UTC git log --no-walk --pretty="%cd" --decorate=full --date=format-local:%Y.%m.%d | head -n 1)
+}
 build() {
   cd $srcdir/${pkgname}-current
   qmake -makefile LPSOLVEDIR=/usr/bin/lp_solve MARBLEDIR=/usr/bin/marble popart.pro

BioArchLinux/popart/lilac.py

@@ -1,11 +0,0 @@
-#!/usr/bin/env python3
-
-from lilaclib import *
-
-def pre_build():
-  update_pkgver_and_pkgrel(_G.newver.lstrip('v'))
-
-def post_build():
-  git_add_files('PKGBUILD')
-  git_commit()
-  update_aur_repo()

BioArchLinux/popart/lilac.yaml

@@ -2,9 +2,11 @@ build_prefix: multilib
 maintainers:
   - github: starsareintherose
     email: kuoi@bioarchlinux.org
-pre_build: vcs_update
-post_build: git_pkgbuild_commit
-
+post_build_script: |
+  git_add_files('PKGBUILD')
+  git_commit()
+  git_pkgbuild_commit()
+  update_aur_repo()
 update_on:
   - source: github
     github: jessicawleigh/popart-current

BioArchLinux/seqlib/lilac.yaml

@@ -2,8 +2,11 @@ build_prefix: extra-x86_64
 maintainers:
   - github: sukanka
     email: su975853527@gmail.com
-pre_build: vcs_update
-post_build: git_pkgbuild_commit
+post_build_script: |
+  git_add_files('PKGBUILD')
+  git_commit()
+  git_pkgbuild_commit()
+  update_aur_repo()
 repo_depends:
   - htslib
 update_on:

BioArchLinux/smartdenovo/PKGBUILD

@@ -13,8 +13,7 @@ source=(git+https://github.com/ruanjue/smartdenovo.git)
 sha256sums=('SKIP')
 pkgver() {
     cd "${srcdir}/${pkgname}"
-    #git describe --long --tags | sed 's/-/+/g' # latest+0+g844215a
-    printf "r%s.%s" "$(git rev-list --count HEAD)" "$(git rev-parse --short HEAD)"
+    printf $(TZ=UTC git log --no-walk --pretty="%cd" --decorate=full --date=format-local:%Y.%m.%d | head -n 1)
 }
 build() {
   cd "${pkgname}"

BioArchLinux/smartdenovo/lilac.py

@@ -1,11 +0,0 @@
-#!/usr/bin/env python3
-from lilaclib import *
-
-def pre_build():
-    update_pkgver_and_pkgrel(_G.newver.lstrip('v'))
-    run_cmd(['updpkgsums'])
-
-def post_build():
-    git_add_files('PKGBUILD')
-    git_commit()
-    update_aur_repo()

BioArchLinux/smartdenovo/lilac.yaml

@@ -2,8 +2,11 @@ build_prefix: extra-x86_64
 maintainers:
   - github: starsareintherose
     email: kuoi@bioarchlinux.org
-pre_build: vcs_update
-post_build: git_pkgbuild_commit
+post_build_script: |
+  git_add_files('PKGBUILD')
+  git_commit()
+  git_pkgbuild_commit()
+  update_aur_repo()
 update_on:
   - source: github
     github: ruanjue/smartdenovo

BioArchLinux/treeviewx/lilac.yaml

@@ -5,7 +5,6 @@ maintainers:
 pre_build_script: |
   update_pkgver_and_pkgrel(_G.newver.lstrip('v'))
   run_cmd(['updpkgsums'])
-  vcs_update()
 post_build_script: |
   git_add_files('PKGBUILD')
   git_commit()

BioArchLinux/vcflib/lilac.py

@@ -1,10 +0,0 @@
-#!/usr/bin/env python3
-from lilaclib import *
-
-def pre_build():
-    update_pkgver_and_pkgrel(_G.newver.lstrip('v'))
-    run_cmd(['updpkgsums'])
-
-def post_build():
-    git_add_files('PKGBUILD')
-    git_commit()

BioArchLinux/vcflib/lilac.yaml

@@ -2,8 +2,12 @@ build_prefix: extra-x86_64
 maintainers:
   - github: sukanka
     email: su975853527@gmail.com
-pre_build: vcs_update
-post_build: git_pkgbuild_commit
+pre_build_script: |
+  update_pkgver_and_pkgrel(_G.newver.lstrip('v'))
+  run_cmd(['updpkgsums'])
+post_build_script: |
+  git_add_files('PKGBUILD')
+  git_commit()
 repo_depends:
   - htslib
   - tabixpp