r-randomwalkrestartmh: use metadata checks

This commit is contained in:
Pekka Ristola 2024-04-15 19:42:18 +03:00
parent a3a0bd7534
commit 1a0d71eff4
No known key found for this signature in database
GPG key ID: 2C20BE716E05213E
3 changed files with 21 additions and 19 deletions

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@ -3,14 +3,13 @@
_pkgname=RandomWalkRestartMH _pkgname=RandomWalkRestartMH
_pkgver=1.22.0 _pkgver=1.22.0
pkgname=r-${_pkgname,,} pkgname=r-${_pkgname,,}
pkgver=1.22.0 pkgver=${_pkgver//-/.}
pkgrel=1 pkgrel=1
pkgdesc='Random walk with restart on multiplex and heterogeneous Networks' pkgdesc="Random walk with restart on multiplex and heterogeneous Networks"
arch=('any') arch=(any)
url="https://bioconductor.org/packages/${_pkgname}" url="https://bioconductor.org/packages/$_pkgname"
license=('GPL') license=('GPL-2.0-or-later')
depends=( depends=(
r
r-dnet r-dnet
r-igraph r-igraph
) )
@ -21,14 +20,15 @@ optdepends=(
r-testthat r-testthat
) )
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('ccb300c5b0cd8af6921f2f96ddbaddd63579db48b9d0f5da553cd206ae107057') md5sums=('ace5e6d73a365094a41a864a47deb893')
b2sums=('9306b7da69f9837f020bfa67eebe676662b6281bf5b5588dc2a333b2a03afed43c3f24fc93f539917ff385bcd1992385c81bc073ecfb323419c17309adc75f77')
build() { build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" mkdir build
R CMD INSTALL -l build "$_pkgname"
} }
package() { package() {
install -dm0755 "${pkgdir}/usr/lib/R/library" install -d "$pkgdir/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
} }
# vim:set ts=2 sw=2 et:

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@ -1,12 +1,13 @@
#!/usr/bin/env python3 #!/usr/bin/env python3
from lilaclib import * from lilaclib import *
import os
import sys
sys.path.append(os.path.normpath(f'{__file__}/../../../lilac-extensions'))
from lilac_r_utils import r_pre_build
def pre_build(): def pre_build():
for line in edit_file('PKGBUILD'): r_pre_build(_G)
if line.startswith('_pkgver='):
line = f'_pkgver={_G.newver}'
print(line)
update_pkgver_and_pkgrel(_G.newver.replace(':', '.').replace('-', '.'))
def post_build(): def post_build():
git_pkgbuild_commit() git_pkgbuild_commit()

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@ -6,7 +6,8 @@ repo_depends:
- r-dnet - r-dnet
- r-igraph - r-igraph
update_on: update_on:
- regex: RandomWalkRestartMH_([\d._-]+).tar.gz - source: rpkgs
source: regex pkgname: RandomWalkRestartMH
url: https://bioconductor.org/packages/RandomWalkRestartMH repo: bioc
md5: true
- alias: r - alias: r