r-rcsl: use latest sources

This commit is contained in:
Pekka Ristola 2024-04-06 14:41:52 +03:00
parent 216c404e45
commit 328321e765
No known key found for this signature in database
GPG key ID: 2C20BE716E05213E
2 changed files with 20 additions and 8 deletions

View file

@ -1,31 +1,38 @@
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> # Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=RCSL _pkgname=RCSL
_pkgver=1.8.0 _pkgver=1.10.1
pkgname=r-${_pkgname,,} pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.} pkgver=${_pkgver//-/.}
pkgrel=2 pkgrel=0
pkgdesc="Rank Constrained Similarity Learning for single cell RNA sequencing data" pkgdesc="Rank Constrained Similarity Learning for single cell RNA sequencing data"
arch=(any) arch=(any)
url="https://bioconductor.org/packages/$_pkgname" url="https://bioconductor.org/packages/$_pkgname"
license=('GPL-3.0-only') license=('Artistic-2.0')
depends=( depends=(
r-ggplot2 r-ggplot2
r-igraph r-igraph
r-matrixgenerics
r-nbclust r-nbclust
r-pracma r-pracma
r-rcpp
r-rcppannoy r-rcppannoy
r-rtsne r-rtsne
r-singlecellexperiment
r-umap r-umap
) )
optdepends=( optdepends=(
r-biocstyle
r-knitr r-knitr
r-mclust r-mclust
r-rmarkdown r-rmarkdown
r-testthat
r-tidyverse
r-tinytex
) )
source=("https://bioconductor.org/packages/3.17/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('014987c88b4b2941c8badfc38c37db2c') md5sums=('eae8dca1f1e34555c4bb49d4c70136b0')
b2sums=('0b445b6f5d9eb345fb443dda312c3b70c825098e2af32bbc34fde98f11fbf9444dead674acebdd98d538401a1fa47f50c013a767f8c637d35ef84f7abc4287ac') b2sums=('81ad0732efcb9ac9f4656176419b24586e4e758533683b04e31f4cb45ed6fff644af056659af778cdf29523980f2af06303ce131949202195ab415ff47aefade')
build() { build() {
mkdir build mkdir build

View file

@ -5,12 +5,17 @@ maintainers:
repo_depends: repo_depends:
- r-ggplot2 - r-ggplot2
- r-igraph - r-igraph
- r-matrixgenerics
- r-nbclust - r-nbclust
- r-pracma - r-pracma
- r-rcpp
- r-rcppannoy - r-rcppannoy
- r-rtsne - r-rtsne
- r-singlecellexperiment
- r-umap - r-umap
update_on: update_on:
- source: manual - source: rpkgs
manual: 1.8.0#014987c88b4b2941c8badfc38c37db2c pkgname: RCSL
repo: bioc
md5: true
- alias: r - alias: r