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r-rcsl: use latest sources
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parent
216c404e45
commit
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2 changed files with 20 additions and 8 deletions
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@ -1,31 +1,38 @@
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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
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_pkgname=RCSL
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_pkgname=RCSL
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_pkgver=1.8.0
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_pkgver=1.10.1
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pkgname=r-${_pkgname,,}
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pkgname=r-${_pkgname,,}
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pkgver=${_pkgver//-/.}
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pkgver=${_pkgver//-/.}
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pkgrel=2
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pkgrel=0
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pkgdesc="Rank Constrained Similarity Learning for single cell RNA sequencing data"
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pkgdesc="Rank Constrained Similarity Learning for single cell RNA sequencing data"
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arch=(any)
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arch=(any)
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url="https://bioconductor.org/packages/$_pkgname"
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url="https://bioconductor.org/packages/$_pkgname"
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license=('GPL-3.0-only')
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license=('Artistic-2.0')
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depends=(
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depends=(
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r-ggplot2
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r-ggplot2
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r-igraph
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r-igraph
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r-matrixgenerics
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r-nbclust
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r-nbclust
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r-pracma
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r-pracma
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r-rcpp
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r-rcppannoy
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r-rcppannoy
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r-rtsne
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r-rtsne
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r-singlecellexperiment
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r-umap
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r-umap
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)
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)
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optdepends=(
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optdepends=(
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r-biocstyle
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r-knitr
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r-knitr
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r-mclust
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r-mclust
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r-rmarkdown
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r-rmarkdown
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r-testthat
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r-tidyverse
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r-tinytex
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)
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)
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source=("https://bioconductor.org/packages/3.17/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
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source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
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md5sums=('014987c88b4b2941c8badfc38c37db2c')
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md5sums=('eae8dca1f1e34555c4bb49d4c70136b0')
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b2sums=('0b445b6f5d9eb345fb443dda312c3b70c825098e2af32bbc34fde98f11fbf9444dead674acebdd98d538401a1fa47f50c013a767f8c637d35ef84f7abc4287ac')
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b2sums=('81ad0732efcb9ac9f4656176419b24586e4e758533683b04e31f4cb45ed6fff644af056659af778cdf29523980f2af06303ce131949202195ab415ff47aefade')
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build() {
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build() {
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mkdir build
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mkdir build
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@ -5,12 +5,17 @@ maintainers:
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repo_depends:
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repo_depends:
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- r-ggplot2
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- r-ggplot2
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- r-igraph
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- r-igraph
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- r-matrixgenerics
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- r-nbclust
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- r-nbclust
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- r-pracma
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- r-pracma
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- r-rcpp
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- r-rcppannoy
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- r-rcppannoy
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- r-rtsne
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- r-rtsne
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- r-singlecellexperiment
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- r-umap
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- r-umap
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update_on:
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update_on:
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- source: manual
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- source: rpkgs
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manual: 1.8.0#014987c88b4b2941c8badfc38c37db2c
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pkgname: RCSL
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repo: bioc
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md5: true
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- alias: r
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- alias: r
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