From 374db38cc987b687606385f75465e4bc83629222 Mon Sep 17 00:00:00 2001
From: bipin kumar <kbipinkumar@users.noreply.github.com>
Date: Fri, 28 Apr 2023 23:10:50 +0530
Subject: [PATCH] python-mappy: fix depends() array in PKGBUILD

---
 BioArchLinux/python-mappy/PKGBUILD   | 17 +++++++++--------
 BioArchLinux/python-mappy/lilac.yaml |  2 +-
 2 files changed, 10 insertions(+), 9 deletions(-)

diff --git a/BioArchLinux/python-mappy/PKGBUILD b/BioArchLinux/python-mappy/PKGBUILD
index 266101ac3e..6656850a0f 100644
--- a/BioArchLinux/python-mappy/PKGBUILD
+++ b/BioArchLinux/python-mappy/PKGBUILD
@@ -1,9 +1,9 @@
 # Maintainer: Bipin Kumar <kbipinkumar@pm.me>
 
 pkgname=python-mappy
-_module=minimap2
+_source=minimap2
 pkgver=2.25
-pkgrel=2
+pkgrel=3
 pkgdesc="Python interface to minimap2, a fast and accurate C program to align genomic and transcribe nucleotide sequences"
 arch=('x86_64')
 url="https://github.com/lh3/minimap2"
@@ -11,30 +11,31 @@ license=('MIT')
 depends=(
          'python'
          'minimap2'
+         'zlib'
+         'glibc'
         )
 makedepends=(
              'python-setuptools'
              'cython'
-             'zlib'
              'python-wheel'
             )
 
 options=(!emptydirs)
-source=("https://github.com/lh3/minimap2/archive/refs/tags/v$pkgver.tar.gz")
+source=(${_source}-${pkgver}.tar.gz::https://github.com/lh3/minimap2/archive/refs/tags/v${pkgver}.tar.gz)
 sha256sums=('9742ff0be01e51ea7d65f70c01d1344eee6f0d7b135359e0c00aec30fb74ac38')
 
 prepare() {
-    cd "$_module-$pkgver"
+    cd ${_source}-${pkgver}
     sed -i 's|CFLAGS=		-g -Wall -O2 -Wc++-compat #-Wextra|CFLAGS=		-g -Wall -O2 -Wc++-compat -fPIC #-Wextra|g' Makefile
  }
 
 build() {
-    cd "$_module-$pkgver"
+    cd ${_source}-${pkgver}
     python setup.py build
 }
 
 package() {
-    cd "$_module-$pkgver"
+    cd ${_source}-${pkgver}
     python setup.py install --root="$pkgdir/" --optimize=1 --skip-build
-    install -Dm644 "LICENSE.txt" -t "$pkgdir/usr/share/licenses/$pkgname"
+    install -Dm644 "LICENSE.txt"  "$pkgdir"/usr/share/licenses/${pkgname}/LICENSE
 }
diff --git a/BioArchLinux/python-mappy/lilac.yaml b/BioArchLinux/python-mappy/lilac.yaml
index 8821107ad2..b863a5e07e 100644
--- a/BioArchLinux/python-mappy/lilac.yaml
+++ b/BioArchLinux/python-mappy/lilac.yaml
@@ -14,4 +14,4 @@ update_on:
   - source: github
     github: lh3/minimap2
     use_latest_release: true
-    prefix: 'v'
\ No newline at end of file
+    prefix: 'v'