r-clevrvis: init

BioArchLinux/r-clevrvis/PKGBUILD

@@ -0,0 +1,54 @@
+# Maintainer: Pekka Ristola <pekkarr [at] protonmail [dot] com>
+
+_pkgname=clevRvis
+_pkgver=1.0.0
+pkgname=r-${_pkgname,,}
+pkgver=${_pkgver//-/.}
+pkgrel=1
+pkgdesc="Visualization Techniques for Clonal Evolution"
+arch=(any)
+url="https://bioconductor.org/packages/${_pkgname}"
+license=(LGPL3)
+depends=(
+  r-colorspace
+  r-colourpicker
+  r-cowplot
+  r-dplyr
+  r-dt
+  r-ggiraph
+  r-ggnewscale
+  r-ggplot2
+  r-ggraph
+  r-htmlwidgets
+  r-igraph
+  r-magrittr
+  r-patchwork
+  r-purrr
+  r-r.utils
+  r-readr
+  r-readxl
+  r-shiny
+  r-shinycssloaders
+  r-shinydashboard
+  r-shinyhelper
+  r-shinywidgets
+  r-tibble
+)
+optdepends=(
+  r-biocstyle
+  r-knitr
+  r-rmarkdown
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+md5sums=('43c9647c43af55cee12813e91c37f569')
+sha256sums=('a4019b1410a607cde7dc2a6b53d6319c669c574fb5cb17fb86e37b03ac5050e8')
+
+build() {
+  mkdir -p build
+  R CMD INSTALL "$_pkgname" -l build
+}
+
+package() {
+  install -d "$pkgdir/usr/lib/R/library"
+  cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
+}

BioArchLinux/r-clevrvis/lilac.py

@@ -0,0 +1,14 @@
+#!/usr/bin/env python3
+from lilaclib import *
+
+import os
+import sys
+sys.path.append(os.path.normpath(f'{__file__}/../../../lilac-extensions'))
+from lilac_r_utils import r_pre_build
+
+def pre_build():
+    r_pre_build(_G)
+
+def post_build():
+    git_pkgbuild_commit()
+    update_aur_repo()

BioArchLinux/r-clevrvis/lilac.yaml

@@ -0,0 +1,34 @@
+build_prefix: extra-x86_64
+maintainers:
+- github: pekkarr
+  email: pekkarr@protonmail.com
+repo_depends:
+- r-colorspace
+- r-colourpicker
+- r-cowplot
+- r-dplyr
+- r-dt
+- r-ggiraph
+- r-ggnewscale
+- r-ggplot2
+- r-ggraph
+- r-htmlwidgets
+- r-igraph
+- r-magrittr
+- r-patchwork
+- r-purrr
+- r-r.utils
+- r-readr
+- r-readxl
+- r-shiny
+- r-shinycssloaders
+- r-shinydashboard
+- r-shinyhelper
+- r-shinywidgets
+- r-tibble
+update_on:
+- source: rpkgs
+  pkgname: clevRvis
+  repo: bioc
+  md5: true
+- alias: r