add muscle

muscle/LICENSE

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+MUSCLE is public domain software 
+
+The MUSCLE software, including object and source code and
+documentation, is hereby donated to the public domain.
+
+Disclaimer of warranty
+
+THIS SOFTWARE IS PROVIDED "AS IS" WITHOUT WARRANTY OF ANY KIND, EITHER
+EXPRESS OR IMPLIED, INCLUDING WITHOUT LIMITATION IMPLIED WARRANTIES OF
+MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.

muscle/PKGBUILD

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+# Maintainer: Michael Schubert <mschu.dev at gmail>
+# Contributor: Mick Elliot <micke@sfu.ca>
+# Contributor: Damir Perisa <damir.perisa@bluewin.ch>
+pkgname=muscle
+pkgver=3.8.1551
+pkgrel=1
+pkgdesc="multiple sequence comparison by log-expectation"
+arch=('i686' 'x86_64')
+url="http://www.drive5.com/muscle/"
+license=('custom')
+source=(http://www.drive5.com/muscle/muscle_src_$pkgver.tar.gz LICENSE)
+sha256sums=('c70c552231cd3289f1bad51c9bd174804c18bb3adcf47f501afec7a68f9c482e'
+            '2ee887dede5d3ddb6fa65690e0afd8d1083d835522d9271450752df0cc2f6658')
+
+build() {
+  cd "$srcdir"
+  if [ "${CARCH}" = "i686" ]; then
+    make CFLAGS=" -march=i686 -mtune=generic -O2 -pipe" LDLIBS=" -lm"
+  else
+    make CFLAGS=" -march=x86-64 -mtune=generic -O2 -pipe" LDLIBS=" -lm"
+  fi
+}
+
+package() {
+  cd "$srcdir"
+  install -D -m755 muscle "$pkgdir/usr/bin/muscle"
+  install -D -m644 "$srcdir/LICENSE" "$pkgdir/usr/share/licenses/$pkgname/LICENSE"
+}
+ 

muscle/lilac.py

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+#!/usr/bin/env python3
+from lilaclib import *
+
+def pre_build():
+    update_pkgver_and_pkgrel(_G.newver.lstrip('v'))
+    run_cmd(['updpkgsums'])
+
+def post_build():
+    git_add_files('PKGBUILD')
+    git_commit()

muscle/lilac.yaml

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+build_prefix: extra-x86_64
+maintainers:
+  - github: starsareintherose
+    email: starsareintherose@outlook.com
+update_on:
+  - regex: muscle_src_(\d+.\d+.\d+).tar.gz
+    source: regex
+    url: http://www.drive5.com/muscle/downloads.htm
+