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beast2: fix applauncher

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This commit is contained in:
Guoyi Zhang 2025-02-26 23:02:24 +11:00
parent 95b6e14f49
commit 490b3fdd39
2 changed files with 8 additions and 12 deletions
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13
BioArchLinux/beast2/PKGBUILD
View file

@ -10,16 +10,19 @@ pkgdesc="Bayesian Evolutionary Analysis by Sampling Trees. https://doi.org/10.13
arch=('any')
url="http://www.beast2.org/"
license=('LGPL-2.1-only')
source=("${pkgname}-${pkgver}.tar.gz::https://github.com/CompEvol/beast2/archive/refs/tags/v${pkgver}.tar.gz"
source=(
"${pkgname}-${pkgver}.tar.gz::https://github.com/CompEvol/beast2/archive/refs/tags/v${pkgver}.tar.gz"
"BeastFX-${_pkgver}.tar.gz::https://github.com/CompEvol/BeastFX/archive/refs/tags/v${_pkgver}.tar.gz"
# desktop
{beauti,densitree,logcombiner,treeannotator,beast2,loganalyser,${pkgname}-applauncher}.desktop
# excutables
${pkgname}-{beauti,densitree,logcombiner,treeannotator,beast2,loganalyser,applauncher,packagemanager,environment}
)
sha256sums=('7c27e4669566c2e8958cb55f2ccf98cc621c0bfbe707b58d0ca15f31ec03e6ba'
'4d746821fd2b1da10e2b616ea33c4484f994faee65667c4c7445d2c95f163edb'
'7f2a6633e5c2ee1ffde58191ae4403ee5b4f4323cea4d6db8fc8c1516294ddf5'
sha256sums=(
'7c27e4669566c2e8958cb55f2ccf98cc621c0bfbe707b58d0ca15f31ec03e6ba'
'4d746821fd2b1da10e2b616ea33c4484f994faee65667c4c7445d2c95f163edb'
'7f2a6633e5c2ee1ffde58191ae4403ee5b4f4323cea4d6db8fc8c1516294ddf5'
'a4c2ae027db8ee3ed687591b25e10581380cb4a3f76f60399018da280276bdfd'
'473657ec9975de6f5e604767ee2ee5cbb6a5c22603624fbf7a94af36d9ccf5db'
'53de8b25293b6f3f85b0abec0678f47dc999aa009e94b863ef5ae28a53c5deb4'
@ -32,7 +35,7 @@ sha256sums=('7c27e4669566c2e8958cb55f2ccf98cc621c0bfbe707b58d0ca15f31ec03e6ba'
'66da5c58a820a6bf1da7508b3084e9cb245e4311882cec80ac7f0ba41c4ce575'
'35842165da98c57f40c490d7eb8a31f189d8f9099268892355d261d712910747'
'ca7447eba08526cd607bd566a7f826d068cb35fc18c1be7429a10c03a50b0e4f'
'337159e676c057af33fdafef8d64fb47e5a78d9130b7d4a8d5dd5c8d1bb8d35f'
'cb516bf1bfddccd5e7de2c0c1feb82e353a7c872e8c45c9fc552dfd5714fc886'
'9ca416360e1697768aa5b9cad2cae13b2d9077dd2386d0950466bad6d5cccf60'
'7b6c125b3dbe7f65cd4903ebca6106893c808f2b444c29aba082f9a66c7ac6af')
depends=('java-runtime' 'java-openjfx')

7
BioArchLinux/beast2/beast2-applauncher
View file

@ -14,14 +14,7 @@ export JFX_MODULES="${JFX_MODULES},$EXTRA_JFX_MODULES"
# use BEAST_EXTRA_LIBS variable to load BEAGLE and other libraries from non-default locations
# this assumes that the library path contains all these libraries (or are set through LD_LIBRARY_PATH)
if [ -n "$BEAST_EXTRA_LIBS" ]; then
"$JAVA" -Dlauncher.wait.for.exit=true -Xms256m -Xmx8g -Djava.library.path="$BEAST_EXTRA_LIBS" -Duser.language=en \
-cp $DEFAULT_CP:$BEAST_LIB/launcher.jar \
--module-path $JFX_LIBS --add-modules "$JFX_MODULES" \
beast.pkgmgmt.launcher.AppLauncherLauncher $*
else
"$JAVA" -Dlauncher.wait.for.exit=true -Xms256m -Xmx8g -Duser.language=en \
-cp $DEFAULT_CP:$BEAST_LIB/launcher.jar \
--module-path $JFX_LIBS --add-modules "$JFX_MODULES" \
beast.pkgmgmt.launcher.AppLauncherLauncher $*
fi