From 4d4bc50a4aca8eb9d8608ac9e34017f6f3da172e Mon Sep 17 00:00:00 2001
From: Pekka Ristola <pekkarr@protonmail.com>
Date: Thu, 15 Jun 2023 20:54:17 +0300
Subject: [PATCH] coin-or-symphony: init, depends for r-lpsymphony

---
 BioArchLinux/coin-or-symphony/PKGBUILD   | 48 ++++++++++++++++++++++++
 BioArchLinux/coin-or-symphony/lilac.yaml | 14 +++++++
 2 files changed, 62 insertions(+)
 create mode 100644 BioArchLinux/coin-or-symphony/PKGBUILD
 create mode 100644 BioArchLinux/coin-or-symphony/lilac.yaml

diff --git a/BioArchLinux/coin-or-symphony/PKGBUILD b/BioArchLinux/coin-or-symphony/PKGBUILD
new file mode 100644
index 0000000000..386c194f57
--- /dev/null
+++ b/BioArchLinux/coin-or-symphony/PKGBUILD
@@ -0,0 +1,48 @@
+# Maintainer: Pekka Ristola <pekkarr [at] protonmail [dot] com>
+# Contributor: Carlos Aznarán <caznaranl@uni.pe>
+# Contributor: Felix Golatofski <felix.golatofski@gmx.de>
+# Contributor: Daniel YC Lin <dlin.tw at gmail>
+
+_base=SYMPHONY
+pkgname=coin-or-${_base,,}
+pkgver=5.7.1
+pkgrel=1
+pkgdesc="COIN-OR solver for mixed-integer linear programs (MILPs)"
+arch=(x86_64)
+url="https://github.com/coin-or/$_base"
+license=(EPL)
+depends=(
+  coin-or-cgl
+  coin-or-clp
+  coin-or-coinutils
+  coin-or-osi
+)
+source=("$_base-releases-$pkgver.tar.gz::$url/archive/releases/$pkgver.tar.gz")
+sha512sums=('3367ec0059dd55d5d581daf1ac6d3ce21eaa857bda334b749ee4534fbf6ed36d3f7bcc9484e70bb3ae2e13c6bf0b8bc193ffa606688a20b79fc7d42c69c9603d')
+
+build() {
+  cd "$_base-releases-$pkgver/$_base"
+  COIN_SKIP_PROJECTS="Sample" \
+    ./configure --prefix=/usr \
+    --with-osi-lib="$(pkg-config --libs osi)" \
+    --with-osi-incdir="/usr/include/coin/" \
+    --with-clp-lib="$(pkg-config --libs clp)" \
+    --with-clp-incdir="/usr/include/coin/" \
+    --with-cgl-lib="$(pkg-config --libs cgl)" \
+    --with-cgl-incdir="/usr/include/coin/" \
+    --with-coinutils-lib="$(pkg-config --libs coinutils)" \
+    --with-coinutils-incdir="/usr/include/coin/" \
+    --enable-dependency-linking \
+    --enable-cbc-parallel
+  # don't link with unused shared libraries
+  sed -E '/SYMPHONYLIB_LIBS = / s/ -l(Cgl|OsiClp|ClpSolver|Clp|cholmod|amd|coinasl|bz2|z|glpk|lapack|blas|m)//g' \
+      -i src/OsiSym/Makefile
+  sed -E '/SYMPHONYLIB_LIBS = / s/ -l(ClpSolver|cholmod|amd|coinasl|bz2|z|glpk|lapack|blas)//g' \
+      -i src/Makefile
+  make
+}
+
+package() {
+  cd "$_base-releases-$pkgver/$_base"
+  make DESTDIR="$pkgdir" install
+}
diff --git a/BioArchLinux/coin-or-symphony/lilac.yaml b/BioArchLinux/coin-or-symphony/lilac.yaml
new file mode 100644
index 0000000000..8039ea3358
--- /dev/null
+++ b/BioArchLinux/coin-or-symphony/lilac.yaml
@@ -0,0 +1,14 @@
+build_prefix: extra-x86_64
+maintainers:
+- github: pekkarr
+  email: pekkarr@protonmail.com
+pre_build_script: |
+  update_pkgver_and_pkgrel(_G.newver)
+  run_cmd(['updpkgsums'])
+post_build_script: |
+  git_pkgbuild_commit()
+update_on:
+- source: github
+  github: coin-or/SYMPHONY
+  use_latest_release: true
+  prefix: releases/