diff --git a/BioArchLinux/r-hdo.db/PKGBUILD b/BioArchLinux/r-hdo.db/PKGBUILD new file mode 100644 index 0000000000..50f25af034 --- /dev/null +++ b/BioArchLinux/r-hdo.db/PKGBUILD @@ -0,0 +1,32 @@ +# Maintainer: sukanka + +_pkgname=HDO.db +_pkgver=0.99.1 +pkgname=r-${_pkgname,,} +pkgver=${_pkgver//[:-]/.} +pkgrel=1 +pkgdesc='A set of annotation maps describing the entire Human Disease Ontology' +arch=('any') +url="https://bioconductor.org/packages/${_pkgname}" +license=('Artistic2.0') +depends=( + r + r-annotationdbi +) +optdepends=( + r-knitr + r-rmarkdown + r-testthat +) +source=("https://bioconductor.org/packages/release/data/annotation/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +sha256sums=('c17cf28d06621d91148a64d47fdeaa906d8621aba7a688715fb9571a55f7cf92') + +build() { + R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" +} + +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" +} +# vim:set ts=2 sw=2 et: diff --git a/BioArchLinux/r-hdo.db/lilac.yaml b/BioArchLinux/r-hdo.db/lilac.yaml new file mode 100644 index 0000000000..2fcb5a8b0e --- /dev/null +++ b/BioArchLinux/r-hdo.db/lilac.yaml @@ -0,0 +1,16 @@ +build_prefix: extra-x86_64 +maintainers: + - github: sukanka +pre_build_script: | + update_pkgver_and_pkgrel(_G.newver.lstrip('v')) + run_cmd(['updpkgsums']) +post_build_script: | + git_add_files('PKGBUILD') + git_commit() + update_aur_repo() +repo_depends: + - r-annotationdbi +update_on: + - regex: HDO.db_([\d._-]+).tar.gz + source: regex + url: https://bioconductor.org/packages/HDO.db