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python-future: init for ipyrad
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parent
fee6f69b6a
commit
5a7d1e37e0
5 changed files with 86 additions and 2 deletions
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@ -5,8 +5,8 @@ pkgdesc="Interactive assembly and analysis of RAD-seq data sets."
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arch=('any')
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arch=('any')
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url="https://github.com/dereneaton/ipyrad"
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url="https://github.com/dereneaton/ipyrad"
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license=('GPL-3.0-or-later')
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license=('GPL-3.0-or-later')
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depends=('python' 'python-pandas' 'python-scipy' 'python-numpy' 'python-numba' 'python-future' 'python-h5py' 'python-ipyparallel' 'python-requests' 'python-mpi4py'
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depends=('python' 'python-pandas' 'python-scipy' 'python-numpy' 'python-numba' 'python-h5py' 'python-ipyparallel' 'python-requests' 'python-mpi4py'
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'cutadapt' 'python-pysam' 'bedtools' 'vsearch' 'bwa' 'samtools' 'python-toyplot')
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'python-future' 'cutadapt' 'python-pysam' 'bedtools' 'vsearch' 'bwa' 'samtools' 'python-toyplot')
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optdepends=('jupyter-notebook: for interactive')
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optdepends=('jupyter-notebook: for interactive')
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makedepends=('python-build' 'python-installer' 'python-wheel' 'gcc' 'make')
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makedepends=('python-build' 'python-installer' 'python-wheel' 'gcc' 'make')
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source=("https://github.com/dereneaton/ipyrad/archive/${pkgver}.tar.gz"
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source=("https://github.com/dereneaton/ipyrad/archive/${pkgver}.tar.gz"
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@ -15,6 +15,7 @@ repo_depends:
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- bwa
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- bwa
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- samtools
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- samtools
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- python-toyplot
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- python-toyplot
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- python-future
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update_on:
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update_on:
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- source: github
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- source: github
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github: dereneaton/ipyrad
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github: dereneaton/ipyrad
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42
BioArchLinux/python-future/PKGBUILD
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42
BioArchLinux/python-future/PKGBUILD
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@ -0,0 +1,42 @@
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# Contributor: Michał Wojdyła < micwoj9292 at gmail dot com >
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# Contributor: Felix Yan <felixonmars@archlinux.org>
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# Contributor: Christopher Arndt <aur -at- chrisarndt -dot- de>
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# Contributor: Gaute Hope <eg@gaute.vetsj.com>
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# Contributor: Melissa Padilla <mpadilla2 at hotmail dot com>
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pkgname=python-future
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pkgver=1.0.0
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pkgrel=4
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pkgdesc="Clean single-source support for Python 3 and 2"
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url="https://python-future.org/"
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arch=('any')
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license=('MIT')
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depends=('python')
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provides=('futurize' 'pasteurize')
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checkdepends=('python-requests' 'python-pytest')
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makedepends=('python-build' 'python-installer' 'python-setuptools' 'python-wheel')
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optdepends=('python-setuptools: futurize and pasteurize scripts')
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options=('!emptydirs')
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source=("https://pypi.io/packages/source/f/future/future-$pkgver.tar.gz")
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sha512sums=('8e28d53172e3ae7b3b27c424a48fb698a6e86bf1c648cdf74e7fd57d34901a9bda18429fe4e176d70be67fc6c80b7f961b3021356594e38b5f294406af40bc61')
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install=future.install
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build() {
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cd "$srcdir"/future-$pkgver
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python -m build --wheel
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}
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# https://github.com/PythonCharmers/python-future/issues/640
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# https://python-future.org/overview.html#status
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check() {
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cd "$srcdir"/future-$pkgver
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# test_future needs python2 so it is disabled here
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#PYTHONPATH="$PWD/build/lib:$PYTHONPATH" pytest -v tests/test_future
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PYTHONPATH="$PWD/build/lib:$PYTHONPATH" pytest -v tests/test_past
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}
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package() {
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cd future-$pkgver
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python -m installer --destdir="$pkgdir" dist/*.whl
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install -D -m644 LICENSE.txt \
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"$pkgdir"/usr/share/licenses/$pkgname/LICENSE.txt
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}
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27
BioArchLinux/python-future/future.install
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27
BioArchLinux/python-future/future.install
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@ -0,0 +1,27 @@
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python_version_warning() {
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echo ""
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echo ""
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echo ""
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echo "WARNING: python-future package is not compatible with Python 3.13"
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echo ""
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echo ""
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echo ""
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echo "The python-future project was created in 2013 to attempt to save Python from the schism of version incompatibility that was threatening to tear apart the language (as Perl 6 contributed to the death of Perl)."
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echo ""
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echo "That time is now past. Thanks to a huge porting effort across the Python community, Python 3 eventually thrived. Python 2 reached its end of life in 2020 and the python-future package should no longer be necessary. Use it to help with porting legacy code to Python 3 but don’t depend on it for new code."
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echo ""
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echo ""
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echo ""
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echo "If you use packages that depend on it, please contact maintainers and/or upstream of these packages and try to work out whether this dependency is really needed."
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echo ""
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echo ""
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echo ""
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}
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post_install() {
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python_version_warning
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}
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post_upgrade() {
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python_version_warning
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}
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14
BioArchLinux/python-future/lilac.yaml
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14
BioArchLinux/python-future/lilac.yaml
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@ -0,0 +1,14 @@
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build_prefix: extra-x86_64
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maintainers:
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- github: starsareintherose
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email: kuoi@bioarchlinux.org
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pre_build_script: |
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update_pkgver_and_pkgrel(_G.newver.lstrip('v'))
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run_cmd(['updpkgsums'])
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post_build_script: |
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git_pkgbuild_commit()
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update_on:
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- source: pypi
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pypi: future
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prefix: 'v'
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- alias: python
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