rebuild

BioArchLinux/beagle-lib-all/PKGBUILD

@@ -3,7 +3,7 @@
 pkgname=beagle-lib-all
 _pkgname=beagle-lib
 pkgver=4.0.0
-pkgrel=4
+pkgrel=5
 pkgdesc="general purpose library for evaluating the likelihood of sequence evolution on trees (with cuda and opencl)"
 arch=('i686' 'x86_64')
 url="https://github.com/beagle-dev/beagle-lib"

BioArchLinux/beagle-lib-cuda/PKGBUILD

@@ -3,7 +3,7 @@
 pkgname=beagle-lib-cuda
 _pkgname=beagle-lib
 pkgver=4.0.0
-pkgrel=4
+pkgrel=5
 pkgdesc="general purpose library for evaluating the likelihood of sequence evolution on trees (with cuda)"
 arch=('i686' 'x86_64')
 url="https://github.com/beagle-dev/beagle-lib"

BioArchLinux/beagle-lib-opencl/PKGBUILD

@@ -3,7 +3,7 @@
 pkgname=beagle-lib-opencl
 _pkgname=beagle-lib
 pkgver=4.0.0
-pkgrel=4
+pkgrel=5
 pkgdesc="general purpose library for evaluating the likelihood of sequence evolution on trees (with opencl)"
 arch=('i686' 'x86_64')
 url="https://github.com/beagle-dev/beagle-lib"

BioArchLinux/beagle-lib/PKGBUILD

@@ -2,7 +2,7 @@
 
 pkgname=beagle-lib
 pkgver=4.0.0
-pkgrel=5
+pkgrel=6
 pkgdesc="general purpose library for evaluating the likelihood of sequence evolution on trees"
 arch=('i686' 'x86_64')
 url="https://github.com/beagle-dev/beagle-lib"

BioArchLinux/gatk/PKGBUILD

@@ -3,7 +3,7 @@
 
 pkgname=gatk
 pkgver=4.2.6.1
-pkgrel=5
+pkgrel=6
 pkgdesc="Variant discovery in high-throughput bioinformatics sequencing data"
 arch=('any')
 url=https://software.broadinstitute.org/"${pkgname}"

BioArchLinux/phyml-mpi/PKGBUILD

@@ -2,7 +2,7 @@
 # Contributor: Mick Elliot <micke at sfu dot ca>
 pkgname=phyml-mpi
 pkgver=3.3.20220408
-pkgrel=1
+pkgrel=2
 pkgdesc="Builds phylogenies from DNA or protein sequences using a maximum likelihood approach. https://doi.org/10.1093/sysbio/syq010"
 arch=('i686' 'x86_64')
 url="https://github.com/stephaneguindon/phyml"
@@ -10,7 +10,7 @@ license=('GPL2')
 conflicts=('phyml')
 depends=('openmpi' 'gcc-libs')
 makedepends=('make' 'autoconf')
-source=($pkgname-$pkgver.tar.gz::$''url/archive/v$pkgver.tar.gz)
+source=(phyml-$pkgver.tar.gz::$''url/archive/v$pkgver.tar.gz)
 sha256sums=('9cef375c0186e8a8d4db72ac02148707624c97174ffac244167a138ceb9f65bd')
 
 build() {

BioArchLinux/phyml/PKGBUILD

@@ -2,7 +2,7 @@
 # Contributor: Mick Elliot <micke at sfu dot ca>
 pkgname=phyml
 pkgver=3.3.20220408
-pkgrel=3
+pkgrel=4
 pkgdesc="Builds phylogenies from DNA or protein sequences using a maximum likelihood approach. https://doi.org/10.1093/sysbio/syq010"
 arch=('i686' 'x86_64')
 url="https://github.com/stephaneguindon/phyml"