r-cellxgenedp: init for r-uniprot.ws

BioArchLinux/r-cellxgenedp/PKGBUILD

@@ -0,0 +1,44 @@
+# system requirements: C++14
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=cellxgenedp
+_pkgver=1.0.0
+pkgname=r-${_pkgname,,}
+pkgver=${_pkgver//[:-]/.}
+pkgrel=1
+pkgdesc='Discover and Access Single Cell Data Sets in the cellxgene Data Portal'
+arch=('x86_64')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('Artistic2.0')
+depends=(
+  r
+  r-cpp11
+  r-curl
+  r-dplyr
+  r-dt
+  r-httr
+  r-jsonlite
+  r-shiny
+)
+optdepends=(
+  r-biocstyle
+  r-hdf5array
+  r-knitr
+  r-mockery
+  r-rmarkdown
+  r-singlecellexperiment
+  r-testthat
+  r-zellkonverter
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('a')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et:

BioArchLinux/r-cellxgenedp/lilac.py

@@ -0,0 +1,12 @@
+#!/usr/bin/env python3
+from lilaclib import *
+
+def pre_build():
+    for line in edit_file('PKGBUILD'):
+        if line.startswith('_pkgver='):
+            line = f'_pkgver={_G.newver}'
+        print(line)
+    update_pkgver_and_pkgrel(_G.newver.replace(':', '.').replace('-', '.'))
+
+def post_build():
+    git_pkgbuild_commit()

BioArchLinux/r-cellxgenedp/lilac.yaml

@@ -0,0 +1,17 @@
+build_prefix: extra-x86_64
+maintainers:
+- github: starsareintherose
+  email: kuoi@bioarchlinux.org
+repo_depends:
+- r-cpp11
+- r-curl
+- r-dplyr
+- r-dt
+- r-httr
+- r-jsonlite
+- r-shiny
+update_on:
+- regex: cellxgenedp_([\d._-]+).tar.gz
+  source: regex
+  url: https://bioconductor.org/packages/cellxgenedp
+- alias: r