mirror of
https://github.com/BioArchLinux/Packages.git
synced 2025-03-10 12:02:42 +00:00
r-*: use metadata checks for several packages
This commit is contained in:
Pekka Ristola
parent
eb1df73a49
commit
6293732ce6
27 changed files with 199 additions and 166 deletions
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@ -1,20 +1,21 @@
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# system requirements: xclip (https://github.com/astrand/xclip) or xsel(http://www.vergenet.net/~conrad/software/xsel/) for accessingthe X11 clipboard
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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
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_pkgname=clipr
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_pkgver=0.8.0
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pkgname=r-${_pkgname,,}
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pkgver=0.8.0
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pkgver=${_pkgver//-/.}
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pkgrel=8
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pkgdesc='Read and Write from the System Clipboard'
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arch=('any')
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url="https://cran.r-project.org/package=${_pkgname}"
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license=('GPL')
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pkgdesc="Read and Write from the System Clipboard"
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arch=(any)
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url="https://cran.r-project.org/package=$_pkgname"
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license=('GPL-3.0-only')
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depends=(
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r
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xclip
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)
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optdepends=(
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"wl-clipboard: accessing Wayland clipboard"
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"xclip: accessing X11 clipboard"
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"xsel: alternative for accessing X11 clipboard"
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r-covr
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r-knitr
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r-rmarkdown
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@ -22,14 +23,15 @@ optdepends=(
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r-testthat
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)
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source=("https://cran.r-project.org/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
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sha256sums=('32c2931992fbec9c31b71de3e27059f1cbb45b4b1f45fd42e0e8dbcec6de3be9')
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md5sums=('558ddf145114bbc0272e6aed05b8e5fe')
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b2sums=('6b489ff1b8353942a327a550eaf9f1f693d74809515990b4e9dc666d7829532d89f368aeb081413dfb7a1e4aeedbb247c570f3187310078ea8bbf264d9b0bb2d')
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build() {
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R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
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mkdir build
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R CMD INSTALL -l build "$_pkgname"
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}
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package() {
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install -dm0755 "${pkgdir}/usr/lib/R/library"
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cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
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install -d "$pkgdir/usr/lib/R/library"
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cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
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}
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# vim:set ts=2 sw=2 et:
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@ -1,12 +1,16 @@
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#!/usr/bin/env python3
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from lilaclib import *
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import os
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import sys
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sys.path.append(os.path.normpath(f'{__file__}/../../../lilac-extensions'))
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from lilac_r_utils import r_pre_build
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def pre_build():
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for line in edit_file('PKGBUILD'):
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if line.startswith('_pkgver='):
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line = f'_pkgver={_G.newver}'
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print(line)
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update_pkgver_and_pkgrel(_G.newver.replace(':', '.').replace('-', '.'))
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r_pre_build(
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_G,
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expect_systemrequirements = "xclip (https://github.com/astrand/xclip) or xsel (http://www.vergenet.net/~conrad/software/xsel/) for accessing the X11 clipboard, or wl-clipboard (https://github.com/bugaevc/wl-clipboard) for systems using Wayland.",
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)
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def post_build():
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git_pkgbuild_commit()
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@ -3,7 +3,8 @@ maintainers:
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- github: starsareintherose
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email: kuoi@bioarchlinux.org
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update_on:
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- regex: clipr_([\d._-]+).tar.gz
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source: regex
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url: https://cran.r-project.org/package=clipr
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- source: rpkgs
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pkgname: clipr
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repo: cran
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md5: true
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- alias: r
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@ -3,27 +3,25 @@
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_pkgname=exactRankTests
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_pkgver=0.8-35
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pkgname=r-${_pkgname,,}
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pkgver=0.8.35
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pkgver=${_pkgver//-/.}
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pkgrel=5
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pkgdesc='Exact Distributions for Rank and Permutation Tests'
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arch=('x86_64')
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url="https://cran.r-project.org/package=${_pkgname}"
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license=('GPL')
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pkgdesc="Exact Distributions for Rank and Permutation Tests"
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arch=(x86_64)
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url="https://cran.r-project.org/package=$_pkgname"
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license=('GPL-2.0-or-later')
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depends=(
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r
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)
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optdepends=(
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r-survival
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)
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source=("https://cran.r-project.org/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
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sha256sums=('7eb4a9ff431a306f634a5feba39c381afb17573e24230976ece843c84e8969e3')
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md5sums=('5c3767db5ff0c9d69b9990d4443f0cad')
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b2sums=('513d696cc55e2663ee8f722bc441c5ec5b0f7f9438ccaacd255e09bf40b93315cd6dd33054a433fbd7a3b29a01bac22a252dc956e57522c443763ba71f31c9a7')
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build() {
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R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
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mkdir build
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R CMD INSTALL -l build "$_pkgname"
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}
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package() {
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install -dm0755 "${pkgdir}/usr/lib/R/library"
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cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
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install -d "$pkgdir/usr/lib/R/library"
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cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
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}
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# vim:set ts=2 sw=2 et:
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@ -1,12 +1,13 @@
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#!/usr/bin/env python3
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from lilaclib import *
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import os
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import sys
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sys.path.append(os.path.normpath(f'{__file__}/../../../lilac-extensions'))
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from lilac_r_utils import r_pre_build
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def pre_build():
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for line in edit_file('PKGBUILD'):
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if line.startswith('_pkgver='):
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line = f'_pkgver={_G.newver}'
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print(line)
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update_pkgver_and_pkgrel(_G.newver.replace(':', '.').replace('-', '.'))
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r_pre_build(_G)
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def post_build():
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git_pkgbuild_commit()
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@ -3,7 +3,8 @@ maintainers:
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- github: starsareintherose
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email: kuoi@bioarchlinux.org
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update_on:
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- regex: exactRankTests_([\d._-]+).tar.gz
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source: regex
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url: https://cran.r-project.org/package=exactRankTests
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- source: rpkgs
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pkgname: exactRankTests
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repo: cran
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md5: true
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- alias: r
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@ -3,12 +3,12 @@
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_pkgname=geeM
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_pkgver=0.10.1
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pkgname=r-${_pkgname,,}
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pkgver=0.10.1
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pkgver=${_pkgver//-/.}
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pkgrel=8
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pkgdesc='Solve Generalized Estimating Equations'
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arch=('any')
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url="https://cran.r-project.org/package=${_pkgname}"
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license=('GPL')
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pkgdesc="Solve Generalized Estimating Equations"
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arch=(any)
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url="https://cran.r-project.org/package=$_pkgname"
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license=('GPL-3.0-only')
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depends=(
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r
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)
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@ -18,14 +18,15 @@ optdepends=(
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r-testthat
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)
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source=("https://cran.r-project.org/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
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sha256sums=('fe76a32981b55835095041e777d1cf2e9ce43edb8d9488db56279f7cb6f43fe5')
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md5sums=('e493043dac3bd7c57b104ace2a6e19d7')
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b2sums=('584fc4ee474abf2c53b7aa6b6a0f602c636eac3fa9d9b87e797aaa69c1d905b535eb8094e6e91608968a4d0227d5249650c17c4e41cecd80957829dfdd52180d')
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build() {
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R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
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mkdir build
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R CMD INSTALL -l build "$_pkgname"
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}
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package() {
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install -dm0755 "${pkgdir}/usr/lib/R/library"
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cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
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install -d "$pkgdir/usr/lib/R/library"
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cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
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}
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# vim:set ts=2 sw=2 et:
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@ -1,12 +1,13 @@
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#!/usr/bin/env python3
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from lilaclib import *
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import os
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import sys
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sys.path.append(os.path.normpath(f'{__file__}/../../../lilac-extensions'))
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from lilac_r_utils import r_pre_build
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def pre_build():
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for line in edit_file('PKGBUILD'):
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if line.startswith('_pkgver='):
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line = f'_pkgver={_G.newver}'
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print(line)
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update_pkgver_and_pkgrel(_G.newver.replace(':', '.').replace('-', '.'))
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r_pre_build(_G)
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def post_build():
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git_pkgbuild_commit()
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@ -3,7 +3,8 @@ maintainers:
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- github: starsareintherose
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email: kuoi@bioarchlinux.org
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update_on:
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- regex: geeM_([\d._-]+).tar.gz
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source: regex
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url: https://cran.r-project.org/package=geeM
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- source: rpkgs
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pkgname: geeM
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repo: cran
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md5: true
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- alias: r
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@ -3,24 +3,25 @@
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_pkgname=ismev
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_pkgver=1.42
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pkgname=r-${_pkgname,,}
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pkgver=1.42
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pkgver=${_pkgver//-/.}
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pkgrel=6
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pkgdesc='An Introduction to Statistical Modeling of Extreme Values'
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arch=('any')
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url="https://cran.r-project.org/package=${_pkgname}"
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license=('GPL')
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pkgdesc="An Introduction to Statistical Modeling of Extreme Values"
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arch=(any)
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url="https://cran.r-project.org/package=$_pkgname"
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license=('GPL-2.0-or-later')
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depends=(
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r
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)
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source=("https://cran.r-project.org/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
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sha256sums=('0d57fbeca83bd478e84fcff795967d51d8448c629abe7adc6c4c18c7fb8bf1a5')
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md5sums=('35d6f5fa7f29eb822d4efad81b3dd59e')
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b2sums=('c87b907c13e55c16ecf71180fd66cf16ebce1cf225efa9139e30fa4953f275a18d8c33d02b5413cfc68ac1ef2ed8e9d09a29d5c81a60fc1989660a80cbb913f3')
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build() {
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R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
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mkdir build
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R CMD INSTALL -l build "$_pkgname"
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}
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package() {
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install -dm0755 "${pkgdir}/usr/lib/R/library"
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cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
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install -d "$pkgdir/usr/lib/R/library"
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cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
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}
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# vim:set ts=2 sw=2 et:
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@ -1,12 +1,13 @@
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#!/usr/bin/env python3
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from lilaclib import *
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import os
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import sys
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sys.path.append(os.path.normpath(f'{__file__}/../../../lilac-extensions'))
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from lilac_r_utils import r_pre_build
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def pre_build():
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for line in edit_file('PKGBUILD'):
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if line.startswith('_pkgver='):
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line = f'_pkgver={_G.newver}'
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print(line)
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update_pkgver_and_pkgrel(_G.newver.replace(':', '.').replace('-', '.'))
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r_pre_build(_G)
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def post_build():
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git_pkgbuild_commit()
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@ -3,7 +3,8 @@ maintainers:
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- github: starsareintherose
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email: kuoi@bioarchlinux.org
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update_on:
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- regex: ismev_([\d._-]+).tar.gz
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source: regex
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url: https://cran.r-project.org/package=ismev
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- source: rpkgs
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pkgname: ismev
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repo: cran
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md5: true
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- alias: r
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@ -3,12 +3,12 @@
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_pkgname=log4r
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_pkgver=0.4.3
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pkgname=r-${_pkgname,,}
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pkgver=0.4.3
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pkgver=${_pkgver//-/.}
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pkgrel=2
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pkgdesc="A Fast and Lightweight Logging System for R, Based on 'log4j'"
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arch=('x86_64')
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url="https://cran.r-project.org/package=${_pkgname}"
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license=('Artistic2.0')
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arch=(x86_64)
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url="https://cran.r-project.org/package=$_pkgname"
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license=('Artistic-2.0')
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depends=(
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r
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)
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@ -28,14 +28,15 @@ optdepends=(
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r-testthat
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)
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source=("https://cran.r-project.org/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
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sha256sums=('dfe3d49d35a8d8f3ad63f156d18e860540a01bd0af0e343cbab3e31a2cf5904c')
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md5sums=('48d5f4212c65e91cbd900c2fbaf2f3d6')
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b2sums=('2ba50dbe1312f564dba282afda0adf9ecbd1b7f4e2e7e9ddb2b1f12f398286c5523321d7686c0733831d19b0d05024f485f90d93b59cd721570c94a8891ee31e')
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build() {
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R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
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mkdir build
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R CMD INSTALL -l build "$_pkgname"
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}
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package() {
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install -dm0755 "${pkgdir}/usr/lib/R/library"
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cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
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install -d "$pkgdir/usr/lib/R/library"
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cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
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}
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# vim:set ts=2 sw=2 et:
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|
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|
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@ -1,12 +1,13 @@
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#!/usr/bin/env python3
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from lilaclib import *
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|
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import os
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import sys
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sys.path.append(os.path.normpath(f'{__file__}/../../../lilac-extensions'))
|
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from lilac_r_utils import r_pre_build
|
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|
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def pre_build():
|
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for line in edit_file('PKGBUILD'):
|
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if line.startswith('_pkgver='):
|
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line = f'_pkgver={_G.newver}'
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print(line)
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update_pkgver_and_pkgrel(_G.newver.replace(':', '.').replace('-', '.'))
|
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r_pre_build(_G)
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|
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def post_build():
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git_pkgbuild_commit()
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|
|
|
|||
|
|
@ -3,7 +3,8 @@ maintainers:
|
|||
- github: starsareintherose
|
||||
email: kuoi@bioarchlinux.org
|
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update_on:
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- regex: log4r_([\d._-]+).tar.gz
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source: regex
|
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url: https://cran.r-project.org/package=log4r
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- source: rpkgs
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pkgname: log4r
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repo: cran
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md5: true
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- alias: r
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|
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@ -3,11 +3,11 @@
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_pkgname=mcmc
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_pkgver=0.9-8
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pkgname=r-${_pkgname,,}
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pkgver=0.9.8
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pkgver=${_pkgver//-/.}
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pkgrel=1
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pkgdesc='Markov Chain Monte Carlo'
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arch=('x86_64')
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url="https://cran.r-project.org/package=${_pkgname}"
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pkgdesc="Markov Chain Monte Carlo"
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arch=(x86_64)
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url="https://cran.r-project.org/package=$_pkgname"
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license=('MIT')
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depends=(
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r
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@ -17,15 +17,18 @@ optdepends=(
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r-xtable
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)
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source=("https://cran.r-project.org/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
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sha256sums=('6a06440d4b58e8a7f122747d92046ff40da4bb58a20bf642228a648a0c826ea7')
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md5sums=('429599a7f24105629c41dd7c9f36b992')
|
||||
b2sums=('d804249a6244e3104687497c83472ec69411e05f3ce580d11b79b3a0278ed2c27d8b902ca6aa3d87f8da3ec169249ffb135ac99e4db17dc688e144e6b95912d7')
|
||||
|
||||
build() {
|
||||
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
|
||||
mkdir build
|
||||
R CMD INSTALL -l build "$_pkgname"
|
||||
}
|
||||
|
||||
package() {
|
||||
install -dm0755 "${pkgdir}/usr/lib/R/library"
|
||||
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
|
||||
install -Dm644 "${_pkgname}/LICENSE" -t "${pkgdir}/usr/share/licenses/${pkgname}"
|
||||
install -d "$pkgdir/usr/lib/R/library"
|
||||
cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
|
||||
|
||||
install -d "$pkgdir/usr/share/licenses/$pkgname"
|
||||
ln -s "/usr/lib/R/library/$_pkgname/LICENSE" "$pkgdir/usr/share/licenses/$pkgname"
|
||||
}
|
||||
# vim:set ts=2 sw=2 et:
|
||||
|
|
|
|||
|
|
@ -1,12 +1,13 @@
|
|||
#!/usr/bin/env python3
|
||||
from lilaclib import *
|
||||
|
||||
import os
|
||||
import sys
|
||||
sys.path.append(os.path.normpath(f'{__file__}/../../../lilac-extensions'))
|
||||
from lilac_r_utils import r_pre_build
|
||||
|
||||
def pre_build():
|
||||
for line in edit_file('PKGBUILD'):
|
||||
if line.startswith('_pkgver='):
|
||||
line = f'_pkgver={_G.newver}'
|
||||
print(line)
|
||||
update_pkgver_and_pkgrel(_G.newver.replace(':', '.').replace('-', '.'))
|
||||
r_pre_build(_G)
|
||||
|
||||
def post_build():
|
||||
git_pkgbuild_commit()
|
||||
|
|
|
|||
|
|
@ -3,7 +3,8 @@ maintainers:
|
|||
- github: starsareintherose
|
||||
email: kuoi@bioarchlinux.org
|
||||
update_on:
|
||||
- regex: mcmc_([\d._-]+).tar.gz
|
||||
source: regex
|
||||
url: https://cran.r-project.org/package=mcmc
|
||||
- source: rpkgs
|
||||
pkgname: mcmc
|
||||
repo: cran
|
||||
md5: true
|
||||
- alias: r
|
||||
|
|
|
|||
|
|
@ -3,24 +3,25 @@
|
|||
_pkgname=miRcompData
|
||||
_pkgver=1.32.0
|
||||
pkgname=r-${_pkgname,,}
|
||||
pkgver=1.32.0
|
||||
pkgver=${_pkgver//-/.}
|
||||
pkgrel=1
|
||||
pkgdesc='Data used in the miRcomp package'
|
||||
arch=('any')
|
||||
url="https://bioconductor.org/packages/${_pkgname}"
|
||||
license=('GPL')
|
||||
pkgdesc="Data used in the miRcomp package"
|
||||
arch=(any)
|
||||
url="https://bioconductor.org/packages/$_pkgname"
|
||||
license=('GPL-3.0-only')
|
||||
depends=(
|
||||
r
|
||||
)
|
||||
source=("https://bioconductor.org/packages/release/data/experiment/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
|
||||
sha256sums=('e61d11cd0352745d221517f0f85654ad6e5923d2670eeff0069797db1bdd8897')
|
||||
md5sums=('0b091222ebe8ac1a3a2c59384931393b')
|
||||
b2sums=('1c41da4e325c58fd0d510c945e2c7fdb76d760557b79890ec5ffc5a967b4993b2a66b3b4f270314ee9848acc288a585ef2b87d1150dbc0c08a8c82a975bbb911')
|
||||
|
||||
build() {
|
||||
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
|
||||
mkdir build
|
||||
R CMD INSTALL -l build "$_pkgname"
|
||||
}
|
||||
|
||||
package() {
|
||||
install -dm0755 "${pkgdir}/usr/lib/R/library"
|
||||
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
|
||||
install -d "$pkgdir/usr/lib/R/library"
|
||||
cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
|
||||
}
|
||||
# vim:set ts=2 sw=2 et:
|
||||
|
|
|
|||
|
|
@ -1,12 +1,16 @@
|
|||
#!/usr/bin/env python3
|
||||
from lilaclib import *
|
||||
|
||||
import os
|
||||
import sys
|
||||
sys.path.append(os.path.normpath(f'{__file__}/../../../lilac-extensions'))
|
||||
from lilac_r_utils import r_pre_build
|
||||
|
||||
def pre_build():
|
||||
for line in edit_file('PKGBUILD'):
|
||||
if line.startswith('_pkgver='):
|
||||
line = f'_pkgver={_G.newver}'
|
||||
print(line)
|
||||
update_pkgver_and_pkgrel(_G.newver.replace(':', '.').replace('-', '.'))
|
||||
r_pre_build(
|
||||
_G,
|
||||
expect_license = "GPL-3 | file LICENSE",
|
||||
)
|
||||
|
||||
def post_build():
|
||||
git_pkgbuild_commit()
|
||||
|
|
|
|||
|
|
@ -3,7 +3,8 @@ maintainers:
|
|||
- github: starsareintherose
|
||||
email: kuoi@bioarchlinux.org
|
||||
update_on:
|
||||
- regex: miRcompData_([\d._-]+).tar.gz
|
||||
source: regex
|
||||
url: https://bioconductor.org/packages/miRcompData
|
||||
- source: rpkgs
|
||||
pkgname: miRcompData
|
||||
repo: bioc-data-experiment
|
||||
md5: true
|
||||
- alias: r
|
||||
|
|
|
|||
|
|
@ -3,24 +3,25 @@
|
|||
_pkgname=SMVar
|
||||
_pkgver=1.3.4
|
||||
pkgname=r-${_pkgname,,}
|
||||
pkgver=1.3.4
|
||||
pkgver=${_pkgver//-/.}
|
||||
pkgrel=7
|
||||
pkgdesc='Structural Model for variances'
|
||||
arch=('any')
|
||||
url="https://cran.r-project.org/package=${_pkgname}"
|
||||
license=('GPL')
|
||||
pkgdesc="Structural Model for Variances"
|
||||
arch=(any)
|
||||
url="https://cran.r-project.org/package=$_pkgname"
|
||||
license=('GPL-2.0-or-later')
|
||||
depends=(
|
||||
r
|
||||
)
|
||||
source=("https://cran.r-project.org/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
|
||||
sha256sums=('aaea3ef7da6cee1bb86fef166df766229c8b7cac9fcf5bc28da7adff5e2c01d6')
|
||||
md5sums=('0cad7d2abfd4be6306eaf2bce923ce7d')
|
||||
b2sums=('da5e76b6e6ecd9d2992943429056ee6956509e9414e15a537e640ecff7efe190029e5c6f726138fb325fac1ffec4fe1fc1d2c54f647d55fcedbacae4f46b912b')
|
||||
|
||||
build() {
|
||||
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
|
||||
mkdir build
|
||||
R CMD INSTALL -l build "$_pkgname"
|
||||
}
|
||||
|
||||
package() {
|
||||
install -dm0755 "${pkgdir}/usr/lib/R/library"
|
||||
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
|
||||
install -d "$pkgdir/usr/lib/R/library"
|
||||
cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
|
||||
}
|
||||
# vim:set ts=2 sw=2 et:
|
||||
|
|
|
|||
|
|
@ -1,12 +1,13 @@
|
|||
#!/usr/bin/env python3
|
||||
from lilaclib import *
|
||||
|
||||
import os
|
||||
import sys
|
||||
sys.path.append(os.path.normpath(f'{__file__}/../../../lilac-extensions'))
|
||||
from lilac_r_utils import r_pre_build
|
||||
|
||||
def pre_build():
|
||||
for line in edit_file('PKGBUILD'):
|
||||
if line.startswith('_pkgver='):
|
||||
line = f'_pkgver={_G.newver}'
|
||||
print(line)
|
||||
update_pkgver_and_pkgrel(_G.newver.replace(':', '.').replace('-', '.'))
|
||||
r_pre_build(_G)
|
||||
|
||||
def post_build():
|
||||
git_pkgbuild_commit()
|
||||
|
|
|
|||
|
|
@ -3,7 +3,8 @@ maintainers:
|
|||
- github: starsareintherose
|
||||
email: kuoi@bioarchlinux.org
|
||||
update_on:
|
||||
- regex: SMVar_([\d._-]+).tar.gz
|
||||
source: regex
|
||||
url: https://cran.r-project.org/package=SMVar
|
||||
- source: rpkgs
|
||||
pkgname: SMVar
|
||||
repo: cran
|
||||
md5: true
|
||||
- alias: r
|
||||
|
|
|
|||
|
|
@ -3,12 +3,12 @@
|
|||
_pkgname=stabs
|
||||
_pkgver=0.6-4
|
||||
pkgname=r-${_pkgname,,}
|
||||
pkgver=0.6.4
|
||||
pkgver=${_pkgver//-/.}
|
||||
pkgrel=8
|
||||
pkgdesc='Stability Selection with Error Control'
|
||||
arch=('any')
|
||||
url="https://cran.r-project.org/package=${_pkgname}"
|
||||
license=('GPL')
|
||||
pkgdesc="Stability Selection with Error Control"
|
||||
arch=(any)
|
||||
url="https://cran.r-project.org/package=$_pkgname"
|
||||
license=('GPL-2.0-only')
|
||||
depends=(
|
||||
r
|
||||
)
|
||||
|
|
@ -24,14 +24,15 @@ optdepends=(
|
|||
r-th.data
|
||||
)
|
||||
source=("https://cran.r-project.org/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
|
||||
sha256sums=('f8507337789f668e421a6ee7b11dd5ea331bf8bff0f9702dd1b93f46c2f3c1d9')
|
||||
md5sums=('b05e82dca362b6442b1c2d2970252509')
|
||||
b2sums=('4c29ed288d3386fe6293b9eeb11fb316879ecb6a1d1198e8fab711fd9b60f283072ea1c0b040d0cd67aa7d34222979a480ae13170b905855e0b72287e9f80108')
|
||||
|
||||
build() {
|
||||
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
|
||||
mkdir build
|
||||
R CMD INSTALL -l build "$_pkgname"
|
||||
}
|
||||
|
||||
package() {
|
||||
install -dm0755 "${pkgdir}/usr/lib/R/library"
|
||||
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
|
||||
install -d "$pkgdir/usr/lib/R/library"
|
||||
cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
|
||||
}
|
||||
# vim:set ts=2 sw=2 et:
|
||||
|
|
|
|||
|
|
@ -1,12 +1,13 @@
|
|||
#!/usr/bin/env python3
|
||||
from lilaclib import *
|
||||
|
||||
import os
|
||||
import sys
|
||||
sys.path.append(os.path.normpath(f'{__file__}/../../../lilac-extensions'))
|
||||
from lilac_r_utils import r_pre_build
|
||||
|
||||
def pre_build():
|
||||
for line in edit_file('PKGBUILD'):
|
||||
if line.startswith('_pkgver='):
|
||||
line = f'_pkgver={_G.newver}'
|
||||
print(line)
|
||||
update_pkgver_and_pkgrel(_G.newver.replace(':', '.').replace('-', '.'))
|
||||
r_pre_build(_G)
|
||||
|
||||
def post_build():
|
||||
git_pkgbuild_commit()
|
||||
|
|
|
|||
|
|
@ -3,7 +3,8 @@ maintainers:
|
|||
- github: starsareintherose
|
||||
email: kuoi@bioarchlinux.org
|
||||
update_on:
|
||||
- regex: stabs_([\d._-]+).tar.gz
|
||||
source: regex
|
||||
url: https://cran.r-project.org/package=stabs
|
||||
- source: rpkgs
|
||||
pkgname: stabs
|
||||
repo: cran
|
||||
md5: true
|
||||
- alias: r
|
||||
|
|
|
|||
Loading…
Add table
Reference in a new issue