r-seurat: fix checkdepends

This commit is contained in:
Pekka Ristola 2024-05-11 12:06:36 +03:00
parent 1394df33d1
commit 6c6de5b101
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2 changed files with 15 additions and 4 deletions

View file

@ -2,10 +2,10 @@
# Contributor: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=Seurat
_pkgver=5.0.3
_pkgver=5.1.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=2
pkgrel=0
pkgdesc="Tools for Single Cell Genomics"
arch=(x86_64)
url="https://cran.r-project.org/package=$_pkgname"
@ -61,14 +61,20 @@ makedepends=(
r-rcppprogress
)
checkdepends=(
r-ape
r-arrow
r-glmgampoi
r-harmony
r-hdf5r
r-limma
r-metap
r-sf
r-singlecellexperiment
r-testthat
)
optdepends=(
r-ape
r-arrow
r-biobase
r-biocgenerics
r-bpcells
@ -99,8 +105,8 @@ optdepends=(
r-vgam
)
source=("https://cran.r-project.org/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('2112a71f0ea07db422650c86aacc5d25')
b2sums=('5a81b01893bf38e5e1e2e25ba3b4226eb3d12488db57983d7850e44f2b2530d10a1419dfd79211611c393a45343ca66a0363e5ee959784298e30a7628a31cdfa')
md5sums=('f0f8ead2778e97d7c06bac7eb6276115')
b2sums=('be75dc34da4ed25041659f746d683b7be1178e31151e81b5a2d34be323d799477eb9f477bc8e6b6748bf018ca8edba8614e7d00eba35615bdd9518e16ccefaf2')
prepare() {
# skip test that requires BPCells

View file

@ -50,9 +50,14 @@ repo_depends:
repo_makedepends:
- r-rcppeigen
- r-rcppprogress
- r-ape
- r-arrow
- r-glmgampoi
- r-harmony
- r-hdf5r
- r-limma
- r-metap
- r-sf
- r-singlecellexperiment
- r-testthat
update_on: