From 81ba94bf0cee66cc7bc74a3a0f65db25a451a1a9 Mon Sep 17 00:00:00 2001
From: Kuoi <starsareintherose@outlook.com>
Date: Sat, 19 Feb 2022 01:41:44 +0000
Subject: [PATCH] add modeltest-ng mpi version

---
 BioArchLinux/modeltest-ng-mpi/PKGBUILD   | 29 ++++++++++++++++++++++++
 BioArchLinux/modeltest-ng-mpi/lilac.py   | 10 ++++++++
 BioArchLinux/modeltest-ng-mpi/lilac.yaml |  8 +++++++
 3 files changed, 47 insertions(+)
 create mode 100644 BioArchLinux/modeltest-ng-mpi/PKGBUILD
 create mode 100644 BioArchLinux/modeltest-ng-mpi/lilac.py
 create mode 100644 BioArchLinux/modeltest-ng-mpi/lilac.yaml

diff --git a/BioArchLinux/modeltest-ng-mpi/PKGBUILD b/BioArchLinux/modeltest-ng-mpi/PKGBUILD
new file mode 100644
index 0000000000..df917cd047
--- /dev/null
+++ b/BioArchLinux/modeltest-ng-mpi/PKGBUILD
@@ -0,0 +1,29 @@
+# Maintainer: Guoyi ("malcology") <guoyizhang@malacology.net>
+# Contributor: Guoyi ("malcology") <guoyizhang@malacology.net>
+
+pkgname=modeltest-ng-mpi
+pkgver=0.1.7
+pkgrel=5
+pkgdesc="A New and Scalable Tool for the Selection of DNA and Protein Evolutionary Models. https://doi.org/10.1093/molbev/msz189"
+url='https://github.com/ddarriba/modeltest'
+arch=('x86_64')
+depends=('openmpi')
+makedepends=('bison' 'git' 'cmake' 'make' 'flex')
+license=('GPL3')
+source=("git+https://github.com/ddarriba/modeltest.git#tag=v${pkgver}")
+sha256sums=('SKIP')
+prepare(){
+  cd ${srcdir}/modeltest
+  git submodule update --init --recursive
+}
+build(){
+  cd ${srcdir}/modeltest/
+  mkdir build && cd build
+  cmake -DUSE_MPI=ON ..
+  make
+}
+
+package() {
+  install -dm755 "${pkgdir}"/usr/bin
+  install -Dm755 "${srcdir}/modeltest/bin/${pkgname}" "${pkgdir}/usr/bin/${pkgname}"
+}
diff --git a/BioArchLinux/modeltest-ng-mpi/lilac.py b/BioArchLinux/modeltest-ng-mpi/lilac.py
new file mode 100644
index 0000000000..8c66f58ed6
--- /dev/null
+++ b/BioArchLinux/modeltest-ng-mpi/lilac.py
@@ -0,0 +1,10 @@
+#!/usr/bin/env python3
+
+from lilaclib import *
+
+def pre_build():
+  update_pkgver_and_pkgrel(_G.newver.lstrip('v'))
+
+def post_build():
+  git_add_files('PKGBUILD')
+  git_commit()
diff --git a/BioArchLinux/modeltest-ng-mpi/lilac.yaml b/BioArchLinux/modeltest-ng-mpi/lilac.yaml
new file mode 100644
index 0000000000..d9083a3ceb
--- /dev/null
+++ b/BioArchLinux/modeltest-ng-mpi/lilac.yaml
@@ -0,0 +1,8 @@
+build_prefix: extra-x86_64
+maintainers:
+  - github: starsareintherose
+    email: starsareintherose@outlook.com
+update_on:
+  - source: github
+    github: ddarriba/modeltest
+    use_latest_release: true