From 8390c93c6d4cbeea3ccd5289eaaa329f3ba467bf Mon Sep 17 00:00:00 2001
From: starsareintherose <starsareintherose@outlook.com>
Date: Thu, 26 Aug 2021 23:41:14 +0800
Subject: [PATCH] add pylonium

---
 phylonium/PKGBUILD   | 34 ++++++++++++++++++++++++++++++++++
 phylonium/lilac.py   | 10 ++++++++++
 phylonium/lilac.yaml |  8 ++++++++
 3 files changed, 52 insertions(+)
 create mode 100644 phylonium/PKGBUILD
 create mode 100644 phylonium/lilac.py
 create mode 100644 phylonium/lilac.yaml

diff --git a/phylonium/PKGBUILD b/phylonium/PKGBUILD
new file mode 100644
index 0000000000..cca3c42b0d
--- /dev/null
+++ b/phylonium/PKGBUILD
@@ -0,0 +1,34 @@
+# Maintainer: Fabian Klötzl <fabian-aur@kloetzl.info>
+pkgname=phylonium
+pkgver=1.5
+pkgrel=1
+pkgdesc="Fast and Accurate Estimation of Evolutionary Distances"
+url="https://github.com/evolbioinf/phylonium/"
+license=("GPL3") # "custom:ISC"
+depends=("libdivsufsort")
+arch=("i686" "x86_64")
+checkdepends=("glib2")
+source=("https://github.com/EvolBioInf/${pkgname}/releases/download/v${pkgver}/${pkgname}-${pkgver}.tar.gz")
+sha256sums=('a84d738ba7a265d0da0d8178255810923f4aa76bf50253e727c46961805ca6a4')
+
+prepare() {
+	cd "${pkgname}-${pkgver}"
+}
+
+check() {
+	cd "${pkgname}-${pkgver}"
+	./configure --prefix=/usr
+	make
+	make check
+}
+
+build() {
+	cd "${pkgname}-${pkgver}"
+	./configure --prefix=/usr
+	make
+}
+
+package() {
+	cd "${pkgname}-${pkgver}"
+	make DESTDIR="${pkgdir}" install
+}
diff --git a/phylonium/lilac.py b/phylonium/lilac.py
new file mode 100644
index 0000000000..8c66f58ed6
--- /dev/null
+++ b/phylonium/lilac.py
@@ -0,0 +1,10 @@
+#!/usr/bin/env python3
+
+from lilaclib import *
+
+def pre_build():
+  update_pkgver_and_pkgrel(_G.newver.lstrip('v'))
+
+def post_build():
+  git_add_files('PKGBUILD')
+  git_commit()
diff --git a/phylonium/lilac.yaml b/phylonium/lilac.yaml
new file mode 100644
index 0000000000..908130d0a0
--- /dev/null
+++ b/phylonium/lilac.yaml
@@ -0,0 +1,8 @@
+build_prefix: extra-x86_64
+maintainers:
+  - github: starsareintherose
+    email: starsareintherose@outlook.com
+update_on:
+  - source: github
+    github: EvolBioInf/phylonium
+    use_latest_release: true