diff --git a/BioArchLinux/r-nonnest2/PKGBUILD b/BioArchLinux/r-nonnest2/PKGBUILD new file mode 100644 index 0000000000..284e620024 --- /dev/null +++ b/BioArchLinux/r-nonnest2/PKGBUILD @@ -0,0 +1,57 @@ +# Maintainer: Pekka Ristola + +_pkgname=nonnest2 +_pkgver=0.5-6 +pkgname=r-${_pkgname,,} +pkgver=${_pkgver//-/.} +pkgrel=1 +pkgdesc="Tests of Non-Nested Models" +arch=(any) +url="https://cran.r-project.org/package=${_pkgname}" +license=(GPL) +depends=( + r-compquadform + r-lavaan + r-mvtnorm + r-sandwich +) +checkdepends=( + r-aer + r-faraway + r-mlogit + r-openmx + r-ordinal + r-pscl + r-testthat +) +optdepends=( + r-aer + r-faraway + r-knitr + r-mirt + r-mlogit + r-openmx + r-ordinal + r-pscl + r-rmarkdown + r-testthat + r-tidysem +) +source=("https://cran.r-project.org/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +md5sums=('404b9edab7bb21841bd359fdfc2c5c82') +sha256sums=('b59144f50fb264fd0d40ee770bf25047bf0f37fa154620d8fe0a91c0065061e8') + +build() { + mkdir -p build + R CMD INSTALL "$_pkgname" -l build +} + +check() { + cd "$_pkgname/tests" + R_LIBS="$srcdir/build" NOT_CRAN=true Rscript --vanilla testthat.R +} + +package() { + install -d "$pkgdir/usr/lib/R/library" + cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library" +} diff --git a/BioArchLinux/r-nonnest2/lilac.py b/BioArchLinux/r-nonnest2/lilac.py new file mode 100644 index 0000000000..b5cdb057c5 --- /dev/null +++ b/BioArchLinux/r-nonnest2/lilac.py @@ -0,0 +1,14 @@ +#!/usr/bin/env python3 +from lilaclib import * + +import os +import sys +sys.path.append(os.path.normpath(f'{__file__}/../../../lilac-extensions')) +from lilac_r_utils import r_pre_build + +def pre_build(): + r_pre_build(_G) + +def post_build(): + git_pkgbuild_commit() + update_aur_repo() diff --git a/BioArchLinux/r-nonnest2/lilac.yaml b/BioArchLinux/r-nonnest2/lilac.yaml new file mode 100644 index 0000000000..77ed7ca0ca --- /dev/null +++ b/BioArchLinux/r-nonnest2/lilac.yaml @@ -0,0 +1,23 @@ +build_prefix: extra-x86_64 +maintainers: +- github: pekkarr + email: pekkarr@protonmail.com +repo_depends: +- r-compquadform +- r-lavaan +- r-mvtnorm +- r-sandwich +repo_makedepends: +- r-aer +- r-faraway +- r-mlogit +- r-openmx +- r-ordinal +- r-pscl +- r-testthat +update_on: +- source: rpkgs + pkgname: nonnest2 + repo: cran + md5: true +- alias: r