diff --git a/BioArchLinux/r-gee/PKGBUILD b/BioArchLinux/r-gee/PKGBUILD new file mode 100644 index 0000000000..9691ec3b96 --- /dev/null +++ b/BioArchLinux/r-gee/PKGBUILD @@ -0,0 +1,31 @@ +# Maintainer: Pekka Ristola + +_pkgname=gee +_pkgver=4.13-25 +pkgname=r-${_pkgname,,} +pkgver=${_pkgver//-/.} +pkgrel=1 +pkgdesc="Generalized Estimation Equation Solver" +arch=(x86_64) +url="https://cran.r-project.org/package=${_pkgname}" +license=(GPL2) +depends=( + blas + r +) +makedepends=( + gcc-fortran +) +source=("https://cran.r-project.org/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +md5sums=('5893e45bd896a40a3aaf1ca848a2f5b5') +sha256sums=('e140881e2febe793a24086a2d179062b9995db901257d678f85d220441400e89') + +build() { + mkdir -p build + R CMD INSTALL "$_pkgname" -l build +} + +package() { + install -d "$pkgdir/usr/lib/R/library" + cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library" +} diff --git a/BioArchLinux/r-gee/lilac.py b/BioArchLinux/r-gee/lilac.py new file mode 100644 index 0000000000..b5cdb057c5 --- /dev/null +++ b/BioArchLinux/r-gee/lilac.py @@ -0,0 +1,14 @@ +#!/usr/bin/env python3 +from lilaclib import * + +import os +import sys +sys.path.append(os.path.normpath(f'{__file__}/../../../lilac-extensions')) +from lilac_r_utils import r_pre_build + +def pre_build(): + r_pre_build(_G) + +def post_build(): + git_pkgbuild_commit() + update_aur_repo() diff --git a/BioArchLinux/r-gee/lilac.yaml b/BioArchLinux/r-gee/lilac.yaml new file mode 100644 index 0000000000..b397d60db0 --- /dev/null +++ b/BioArchLinux/r-gee/lilac.yaml @@ -0,0 +1,14 @@ +build_prefix: extra-x86_64 +maintainers: +- github: pekkarr + email: pekkarr@protonmail.com +update_on: +- source: rpkgs + pkgname: gee + repo: cran + md5: true +- alias: r +- source: alpmfiles + pkgname: blas + filename: usr/lib/libblas\.so\.([^.]+) + repo: extra