From 94249643351ba7a3e20eb9ef5e66bbabc42eee90 Mon Sep 17 00:00:00 2001 From: Pekka Ristola Date: Wed, 17 Jan 2024 21:45:55 +0200 Subject: [PATCH] r-*: use SPDX license identifier for "GPL-3" --- BioArchLinux/r-acde/PKGBUILD | 2 +- BioArchLinux/r-additivitytests/PKGBUILD | 2 +- BioArchLinux/r-assertthat/PKGBUILD | 2 +- BioArchLinux/r-atacseqtfea/PKGBUILD | 2 +- BioArchLinux/r-basicstan/PKGBUILD | 2 +- BioArchLinux/r-beachmat.hdf5/PKGBUILD | 2 +- BioArchLinux/r-benford.analysis/PKGBUILD | 2 +- BioArchLinux/r-benfordtests/PKGBUILD | 2 +- BioArchLinux/r-bigassertr/PKGBUILD | 2 +- BioArchLinux/r-bigrquery/PKGBUILD | 2 +- BioArchLinux/r-bigutilsr/PKGBUILD | 2 +- BioArchLinux/r-biocsingular/PKGBUILD | 2 +- BioArchLinux/r-bionero/PKGBUILD | 2 +- BioArchLinux/r-bookdown/PKGBUILD | 2 +- BioArchLinux/r-bsda/PKGBUILD | 2 +- BioArchLinux/r-canvasxpress.data/PKGBUILD | 2 +- BioArchLinux/r-canvasxpress/PKGBUILD | 2 +- BioArchLinux/r-cardelino/PKGBUILD | 2 +- BioArchLinux/r-catools/PKGBUILD | 2 +- BioArchLinux/r-ccimpute/PKGBUILD | 2 +- BioArchLinux/r-cfdnakit/PKGBUILD | 2 +- BioArchLinux/r-chihaya/PKGBUILD | 2 +- BioArchLinux/r-chromstardata/PKGBUILD | 2 +- BioArchLinux/r-clubsandwich/PKGBUILD | 2 +- BioArchLinux/r-cohcap/PKGBUILD | 2 +- BioArchLinux/r-cohcapanno/PKGBUILD | 2 +- BioArchLinux/r-colourvalues/PKGBUILD | 2 +- BioArchLinux/r-comethdmr/PKGBUILD | 2 +- BioArchLinux/r-consrank/PKGBUILD | 2 +- BioArchLinux/r-cotan/PKGBUILD | 2 +- BioArchLinux/r-ctsv/PKGBUILD | 2 +- BioArchLinux/r-cubature/PKGBUILD | 2 +- BioArchLinux/r-cytomem/PKGBUILD | 2 +- BioArchLinux/r-cytopipeline/PKGBUILD | 2 +- BioArchLinux/r-cytoviewer/PKGBUILD | 2 +- BioArchLinux/r-delayedrandomarray/PKGBUILD | 2 +- BioArchLinux/r-demuxsnp/PKGBUILD | 2 +- BioArchLinux/r-depinfer/PKGBUILD | 2 +- BioArchLinux/r-despace/PKGBUILD | 2 +- BioArchLinux/r-dgeobj.utils/PKGBUILD | 2 +- BioArchLinux/r-dgeobj/PKGBUILD | 2 +- BioArchLinux/r-dicedesign/PKGBUILD | 2 +- BioArchLinux/r-differentialregulation/PKGBUILD | 2 +- BioArchLinux/r-diffusionmap/PKGBUILD | 2 +- BioArchLinux/r-diffustats/PKGBUILD | 2 +- BioArchLinux/r-directpa/PKGBUILD | 2 +- BioArchLinux/r-dixontest/PKGBUILD | 2 +- BioArchLinux/r-dnafusion/PKGBUILD | 2 +- BioArchLinux/r-doubletrouble/PKGBUILD | 2 +- BioArchLinux/r-dreamerr/PKGBUILD | 2 +- BioArchLinux/r-edirquery/PKGBUILD | 2 +- BioArchLinux/r-epimix.data/PKGBUILD | 2 +- BioArchLinux/r-epimix/PKGBUILD | 2 +- BioArchLinux/r-epistasisga/PKGBUILD | 2 +- BioArchLinux/r-exact2x2/PKGBUILD | 2 +- BioArchLinux/r-exactci/PKGBUILD | 2 +- BioArchLinux/r-extrachips/PKGBUILD | 2 +- BioArchLinux/r-eztune/PKGBUILD | 2 +- BioArchLinux/r-fcps/PKGBUILD | 2 +- BioArchLinux/r-featseekr/PKGBUILD | 2 +- BioArchLinux/r-fixest/PKGBUILD | 2 +- BioArchLinux/r-flatxml/PKGBUILD | 2 +- BioArchLinux/r-geoexplorer/PKGBUILD | 2 +- BioArchLinux/r-ggvenndiagram/PKGBUILD | 2 +- BioArchLinux/r-ggwordcloud/PKGBUILD | 2 +- BioArchLinux/r-gopro/PKGBUILD | 2 +- BioArchLinux/r-gosorensen/PKGBUILD | 2 +- BioArchLinux/r-gower/PKGBUILD | 2 +- BioArchLinux/r-gsl/PKGBUILD | 2 +- BioArchLinux/r-gunifrac/PKGBUILD | 2 +- BioArchLinux/r-harmonizr/PKGBUILD | 2 +- BioArchLinux/r-harmony/PKGBUILD | 2 +- BioArchLinux/r-herper/PKGBUILD | 2 +- BioArchLinux/r-hibag/PKGBUILD | 2 +- BioArchLinux/r-hicvenndiagram/PKGBUILD | 2 +- BioArchLinux/r-ibreakdown/PKGBUILD | 2 +- BioArchLinux/r-illumina450probevariants.db/PKGBUILD | 2 +- BioArchLinux/r-inetgrate/PKGBUILD | 2 +- BioArchLinux/r-ingredients/PKGBUILD | 2 +- BioArchLinux/r-ini/PKGBUILD | 2 +- BioArchLinux/r-insight/PKGBUILD | 2 +- BioArchLinux/r-intomics/PKGBUILD | 2 +- BioArchLinux/r-irlba/PKGBUILD | 2 +- BioArchLinux/r-isobayes/PKGBUILD | 2 +- BioArchLinux/r-kit/PKGBUILD | 2 +- BioArchLinux/r-lazyeval/PKGBUILD | 2 +- BioArchLinux/r-logging/PKGBUILD | 2 +- BioArchLinux/r-magrene/PKGBUILD | 2 +- BioArchLinux/r-mariner/PKGBUILD | 2 +- BioArchLinux/r-marinerdata/PKGBUILD | 2 +- BioArchLinux/r-metabma/PKGBUILD | 2 +- BioArchLinux/r-metavolcanor/PKGBUILD | 2 +- BioArchLinux/r-microbiomestat/PKGBUILD | 2 +- BioArchLinux/r-microstasis/PKGBUILD | 2 +- BioArchLinux/r-micsqtl/PKGBUILD | 2 +- BioArchLinux/r-mockr/PKGBUILD | 2 +- BioArchLinux/r-modelr/PKGBUILD | 2 +- BioArchLinux/r-moonlight2r/PKGBUILD | 2 +- BioArchLinux/r-mslp/PKGBUILD | 2 +- BioArchLinux/r-msquality/PKGBUILD | 2 +- BioArchLinux/r-mudata/PKGBUILD | 2 +- BioArchLinux/r-multiwgcna/PKGBUILD | 2 +- BioArchLinux/r-ncigraph/PKGBUILD | 2 +- BioArchLinux/r-ncmeta/PKGBUILD | 2 +- BioArchLinux/r-netboost/PKGBUILD | 2 +- BioArchLinux/r-netzoor/PKGBUILD | 2 +- BioArchLinux/r-nipalsmcia/PKGBUILD | 2 +- BioArchLinux/r-nullrangesdata/PKGBUILD | 2 +- BioArchLinux/r-oaqc/PKGBUILD | 2 +- BioArchLinux/r-omada/PKGBUILD | 2 +- BioArchLinux/r-paletteer/PKGBUILD | 2 +- BioArchLinux/r-palr/PKGBUILD | 2 +- BioArchLinux/r-pan/PKGBUILD | 2 +- BioArchLinux/r-pbdzmq/PKGBUILD | 2 +- BioArchLinux/r-performance/PKGBUILD | 2 +- BioArchLinux/r-pkgload/PKGBUILD | 2 +- BioArchLinux/r-ppcseq/PKGBUILD | 2 +- BioArchLinux/r-protgear/PKGBUILD | 2 +- BioArchLinux/r-proxyc/PKGBUILD | 2 +- BioArchLinux/r-qmtools/PKGBUILD | 2 +- BioArchLinux/r-qtlexperiment/PKGBUILD | 2 +- BioArchLinux/r-quanteda/PKGBUILD | 2 +- BioArchLinux/r-quantiseqr/PKGBUILD | 2 +- BioArchLinux/r-raresim/PKGBUILD | 2 +- BioArchLinux/r-readods/PKGBUILD | 2 +- BioArchLinux/r-residualmatrix/PKGBUILD | 2 +- BioArchLinux/r-retrofit/PKGBUILD | 2 +- BioArchLinux/r-rmarkdown/PKGBUILD | 2 +- BioArchLinux/r-rmixmod/PKGBUILD | 2 +- BioArchLinux/r-rnaseqcovarimpute/PKGBUILD | 2 +- BioArchLinux/r-roastgsa/PKGBUILD | 2 +- BioArchLinux/r-robtt/PKGBUILD | 2 +- BioArchLinux/r-rolde/PKGBUILD | 2 +- BioArchLinux/r-rpart.plot/PKGBUILD | 2 +- BioArchLinux/r-rprimer/PKGBUILD | 2 +- BioArchLinux/r-rugarch/PKGBUILD | 2 +- BioArchLinux/r-sarc/PKGBUILD | 2 +- BioArchLinux/r-sccomp/PKGBUILD | 2 +- BioArchLinux/r-scfeatures/PKGBUILD | 2 +- BioArchLinux/r-scmet/PKGBUILD | 2 +- BioArchLinux/r-scrnaseqapp/PKGBUILD | 2 +- BioArchLinux/r-scs/PKGBUILD | 2 +- BioArchLinux/r-seqarchrplus/PKGBUILD | 2 +- BioArchLinux/r-seriation/PKGBUILD | 2 +- BioArchLinux/r-sgcp/PKGBUILD | 2 +- BioArchLinux/r-shinylogs/PKGBUILD | 2 +- BioArchLinux/r-shinymanager/PKGBUILD | 2 +- BioArchLinux/r-shinymeta/PKGBUILD | 2 +- BioArchLinux/r-sigspack/PKGBUILD | 2 +- BioArchLinux/r-simpleseg/PKGBUILD | 2 +- BioArchLinux/r-speckle/PKGBUILD | 2 +- BioArchLinux/r-spotclean/PKGBUILD | 2 +- BioArchLinux/r-ssanv/PKGBUILD | 2 +- BioArchLinux/r-ssnappy/PKGBUILD | 2 +- BioArchLinux/r-statial/PKGBUILD | 2 +- BioArchLinux/r-stdeconvolve/PKGBUILD | 2 +- BioArchLinux/r-strex/PKGBUILD | 2 +- BioArchLinux/r-stringdist/PKGBUILD | 2 +- BioArchLinux/r-svmdo/PKGBUILD | 2 +- BioArchLinux/r-syntenet/PKGBUILD | 2 +- BioArchLinux/r-tadar/PKGBUILD | 2 +- BioArchLinux/r-tca/PKGBUILD | 2 +- BioArchLinux/r-tdbasedufe/PKGBUILD | 2 +- BioArchLinux/r-tdbasedufeadv/PKGBUILD | 2 +- BioArchLinux/r-testit/PKGBUILD | 2 +- BioArchLinux/r-tidyheatmap/PKGBUILD | 2 +- BioArchLinux/r-tidyseurat/PKGBUILD | 2 +- BioArchLinux/r-timechange/PKGBUILD | 2 +- BioArchLinux/r-tinytest/PKGBUILD | 2 +- BioArchLinux/r-top/PKGBUILD | 2 +- BioArchLinux/r-tsibble/PKGBUILD | 2 +- BioArchLinux/r-ttservice/PKGBUILD | 2 +- BioArchLinux/r-vgam/PKGBUILD | 2 +- BioArchLinux/r-whisker/PKGBUILD | 2 +- lilac-extensions/lilac_r_utils.py | 2 +- 175 files changed, 175 insertions(+), 175 deletions(-) diff --git a/BioArchLinux/r-acde/PKGBUILD b/BioArchLinux/r-acde/PKGBUILD index ceeb875659..28201c0abd 100644 --- a/BioArchLinux/r-acde/PKGBUILD +++ b/BioArchLinux/r-acde/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Artificial Components Detection of Differentially Expressed Genes" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r ) diff --git a/BioArchLinux/r-additivitytests/PKGBUILD b/BioArchLinux/r-additivitytests/PKGBUILD index 4a2c2b0f94..4bf8dbadbd 100644 --- a/BioArchLinux/r-additivitytests/PKGBUILD +++ b/BioArchLinux/r-additivitytests/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=6 pkgdesc="Additivity Tests in the Two Way Anova with Single Sub-Class Numbers" arch=(any) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r ) diff --git a/BioArchLinux/r-assertthat/PKGBUILD b/BioArchLinux/r-assertthat/PKGBUILD index f130418ad8..bb0c44e18c 100644 --- a/BioArchLinux/r-assertthat/PKGBUILD +++ b/BioArchLinux/r-assertthat/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=14 pkgdesc="Easy Pre and Post Assertions" arch=(any) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r ) diff --git a/BioArchLinux/r-atacseqtfea/PKGBUILD b/BioArchLinux/r-atacseqtfea/PKGBUILD index cf7b721a9b..9501c47af5 100644 --- a/BioArchLinux/r-atacseqtfea/PKGBUILD +++ b/BioArchLinux/r-atacseqtfea/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Transcription Factor Enrichment Analysis for ATAC-seq" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-biocgenerics r-dplyr diff --git a/BioArchLinux/r-basicstan/PKGBUILD b/BioArchLinux/r-basicstan/PKGBUILD index 49368f36f2..24291cf45c 100644 --- a/BioArchLinux/r-basicstan/PKGBUILD +++ b/BioArchLinux/r-basicstan/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Stan implementation of BASiCS" arch=(x86_64) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-basics r-glmgampoi diff --git a/BioArchLinux/r-beachmat.hdf5/PKGBUILD b/BioArchLinux/r-beachmat.hdf5/PKGBUILD index 351181fa7f..cfd688016a 100644 --- a/BioArchLinux/r-beachmat.hdf5/PKGBUILD +++ b/BioArchLinux/r-beachmat.hdf5/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="beachmat bindings for HDF5-backed matrices" arch=(x86_64) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-beachmat r-delayedarray diff --git a/BioArchLinux/r-benford.analysis/PKGBUILD b/BioArchLinux/r-benford.analysis/PKGBUILD index 22e6d823ed..76bd7793e4 100644 --- a/BioArchLinux/r-benford.analysis/PKGBUILD +++ b/BioArchLinux/r-benford.analysis/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Benford Analysis for Data Validation and Forensic Analytics" arch=(any) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-data.table ) diff --git a/BioArchLinux/r-benfordtests/PKGBUILD b/BioArchLinux/r-benfordtests/PKGBUILD index c4c5df7016..49562ea003 100644 --- a/BioArchLinux/r-benfordtests/PKGBUILD +++ b/BioArchLinux/r-benfordtests/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Statistical Tests for Evaluating Conformity to Benford's Law" arch=(x86_64) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r ) diff --git a/BioArchLinux/r-bigassertr/PKGBUILD b/BioArchLinux/r-bigassertr/PKGBUILD index 661b3437f6..5e808cf4be 100644 --- a/BioArchLinux/r-bigassertr/PKGBUILD +++ b/BioArchLinux/r-bigassertr/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=3 pkgdesc="Assertion and Message Functions" arch=(any) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r ) diff --git a/BioArchLinux/r-bigrquery/PKGBUILD b/BioArchLinux/r-bigrquery/PKGBUILD index 96fc3980de..7b1fa4c67c 100644 --- a/BioArchLinux/r-bigrquery/PKGBUILD +++ b/BioArchLinux/r-bigrquery/PKGBUILD @@ -9,7 +9,7 @@ pkgrel=5 pkgdesc="An Interface to Google's 'BigQuery' 'API'" arch=(x86_64) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-assertthat r-bit64 diff --git a/BioArchLinux/r-bigutilsr/PKGBUILD b/BioArchLinux/r-bigutilsr/PKGBUILD index b2b43f43b3..684cb89aee 100644 --- a/BioArchLinux/r-bigutilsr/PKGBUILD +++ b/BioArchLinux/r-bigutilsr/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Utility Functions for Large-scale Data" arch=(x86_64) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-bigassertr r-bigparallelr diff --git a/BioArchLinux/r-biocsingular/PKGBUILD b/BioArchLinux/r-biocsingular/PKGBUILD index 89e50c7340..694d237e2f 100644 --- a/BioArchLinux/r-biocsingular/PKGBUILD +++ b/BioArchLinux/r-biocsingular/PKGBUILD @@ -9,7 +9,7 @@ pkgrel=1 pkgdesc="Singular Value Decomposition for Bioconductor Packages" arch=(x86_64) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-beachmat r-biocgenerics diff --git a/BioArchLinux/r-bionero/PKGBUILD b/BioArchLinux/r-bionero/PKGBUILD index 3830099978..12c3feeb1e 100644 --- a/BioArchLinux/r-bionero/PKGBUILD +++ b/BioArchLinux/r-bionero/PKGBUILD @@ -9,7 +9,7 @@ pkgrel=1 pkgdesc="Biological Network Reconstruction Omnibus" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-biocparallel r-complexheatmap diff --git a/BioArchLinux/r-bookdown/PKGBUILD b/BioArchLinux/r-bookdown/PKGBUILD index 118bad05ea..8859f4d322 100644 --- a/BioArchLinux/r-bookdown/PKGBUILD +++ b/BioArchLinux/r-bookdown/PKGBUILD @@ -11,7 +11,7 @@ pkgrel=1 pkgdesc="Authoring Books and Technical Documents with R Markdown" arch=(any) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( pandoc r-htmltools diff --git a/BioArchLinux/r-bsda/PKGBUILD b/BioArchLinux/r-bsda/PKGBUILD index 012113dcef..32fb214490 100644 --- a/BioArchLinux/r-bsda/PKGBUILD +++ b/BioArchLinux/r-bsda/PKGBUILD @@ -10,7 +10,7 @@ pkgrel=2 pkgdesc="Basic Statistics and Data Analysis" arch=(any) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-e1071 ) diff --git a/BioArchLinux/r-canvasxpress.data/PKGBUILD b/BioArchLinux/r-canvasxpress.data/PKGBUILD index f5eb0eddd9..fb1e6a9ad4 100644 --- a/BioArchLinux/r-canvasxpress.data/PKGBUILD +++ b/BioArchLinux/r-canvasxpress.data/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Datasets for the 'canvasXpress' Package" arch=(any) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r ) diff --git a/BioArchLinux/r-canvasxpress/PKGBUILD b/BioArchLinux/r-canvasxpress/PKGBUILD index 67bb7f79ee..5b1e45ebc7 100644 --- a/BioArchLinux/r-canvasxpress/PKGBUILD +++ b/BioArchLinux/r-canvasxpress/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Visualization Package for CanvasXpress in R" arch=(any) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-htmltools r-htmlwidgets diff --git a/BioArchLinux/r-cardelino/PKGBUILD b/BioArchLinux/r-cardelino/PKGBUILD index d6c5815f88..f52e0408e0 100644 --- a/BioArchLinux/r-cardelino/PKGBUILD +++ b/BioArchLinux/r-cardelino/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Clone Identification from Single Cell Data" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-combinat r-genomeinfodb diff --git a/BioArchLinux/r-catools/PKGBUILD b/BioArchLinux/r-catools/PKGBUILD index b3ec61c21c..b1e68e2fdb 100644 --- a/BioArchLinux/r-catools/PKGBUILD +++ b/BioArchLinux/r-catools/PKGBUILD @@ -12,7 +12,7 @@ pkgrel=10 pkgdesc="Tools: Moving Window Statistics, GIF, Base64, ROC AUC, etc" arch=(x86_64) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-bitops ) diff --git a/BioArchLinux/r-ccimpute/PKGBUILD b/BioArchLinux/r-ccimpute/PKGBUILD index bff5d5ee6b..c2f525c275 100644 --- a/BioArchLinux/r-ccimpute/PKGBUILD +++ b/BioArchLinux/r-ccimpute/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=3 pkgdesc="an accurate and scalable consensus clustering based approach to impute dropout events in the single-cell RNA-seq data" arch=(x86_64) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-biocparallel r-matrixstats diff --git a/BioArchLinux/r-cfdnakit/PKGBUILD b/BioArchLinux/r-cfdnakit/PKGBUILD index 6c12373c95..c1d28fcb0f 100644 --- a/BioArchLinux/r-cfdnakit/PKGBUILD +++ b/BioArchLinux/r-cfdnakit/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Fragmen-length analysis package from high-throughput sequencing of cell-free DNA (cfDNA)" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-biobase r-dplyr diff --git a/BioArchLinux/r-chihaya/PKGBUILD b/BioArchLinux/r-chihaya/PKGBUILD index a8eede1dc0..52f848cddc 100644 --- a/BioArchLinux/r-chihaya/PKGBUILD +++ b/BioArchLinux/r-chihaya/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=1 pkgdesc="Save Delayed Operations to a HDF5 File" arch=(x86_64) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-delayedarray r-hdf5array diff --git a/BioArchLinux/r-chromstardata/PKGBUILD b/BioArchLinux/r-chromstardata/PKGBUILD index 5d0c8e1fd4..787f1a0439 100644 --- a/BioArchLinux/r-chromstardata/PKGBUILD +++ b/BioArchLinux/r-chromstardata/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="ChIP-seq data for Demonstration Purposes" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r ) diff --git a/BioArchLinux/r-clubsandwich/PKGBUILD b/BioArchLinux/r-clubsandwich/PKGBUILD index d6b3d9ac9a..c286305408 100644 --- a/BioArchLinux/r-clubsandwich/PKGBUILD +++ b/BioArchLinux/r-clubsandwich/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=3 pkgdesc="Cluster-Robust (Sandwich) Variance Estimators with Small-Sample Corrections" arch=(any) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-sandwich ) diff --git a/BioArchLinux/r-cohcap/PKGBUILD b/BioArchLinux/r-cohcap/PKGBUILD index bd09522eb2..8d050c6e2b 100644 --- a/BioArchLinux/r-cohcap/PKGBUILD +++ b/BioArchLinux/r-cohcap/PKGBUILD @@ -9,7 +9,7 @@ pkgrel=1 pkgdesc="CpG Island Analysis Pipeline for Illumina Methylation Array and Targeted BS-Seq Data" arch=(x86_64) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( perl r-bh diff --git a/BioArchLinux/r-cohcapanno/PKGBUILD b/BioArchLinux/r-cohcapanno/PKGBUILD index bbb49db786..54cc1cac34 100644 --- a/BioArchLinux/r-cohcapanno/PKGBUILD +++ b/BioArchLinux/r-cohcapanno/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Annotations for City of Hope CpG Island Analysis Pipeline" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r ) diff --git a/BioArchLinux/r-colourvalues/PKGBUILD b/BioArchLinux/r-colourvalues/PKGBUILD index a85c06a6d2..e59d8ba8b9 100644 --- a/BioArchLinux/r-colourvalues/PKGBUILD +++ b/BioArchLinux/r-colourvalues/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=3 pkgdesc="Assigns Colours to Values" arch=(x86_64) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-rcpp ) diff --git a/BioArchLinux/r-comethdmr/PKGBUILD b/BioArchLinux/r-comethdmr/PKGBUILD index 421b62cecd..bc77fd93fe 100644 --- a/BioArchLinux/r-comethdmr/PKGBUILD +++ b/BioArchLinux/r-comethdmr/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Accurate identification of co-methylated and differentially methylated regions in epigenome-wide association studies" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-annotationhub r-biocparallel diff --git a/BioArchLinux/r-consrank/PKGBUILD b/BioArchLinux/r-consrank/PKGBUILD index 89441a79fe..99ba79aa03 100644 --- a/BioArchLinux/r-consrank/PKGBUILD +++ b/BioArchLinux/r-consrank/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Compute the Median Ranking(s) According to the Kemeny's Axiomatic Approach" arch=(any) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-gtools r-proxy diff --git a/BioArchLinux/r-cotan/PKGBUILD b/BioArchLinux/r-cotan/PKGBUILD index 623bc5caf8..2b849f550d 100644 --- a/BioArchLinux/r-cotan/PKGBUILD +++ b/BioArchLinux/r-cotan/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=1 pkgdesc="COexpression Tables ANalysis" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-assertthat r-biocsingular diff --git a/BioArchLinux/r-ctsv/PKGBUILD b/BioArchLinux/r-ctsv/PKGBUILD index 7ecf6b50f7..e706dbc13c 100644 --- a/BioArchLinux/r-ctsv/PKGBUILD +++ b/BioArchLinux/r-ctsv/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Identification of cell-type-specific spatially variable genes accounting for excess zeros" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-biocparallel r-knitr diff --git a/BioArchLinux/r-cubature/PKGBUILD b/BioArchLinux/r-cubature/PKGBUILD index ab1e00da8a..aa6f640f1d 100644 --- a/BioArchLinux/r-cubature/PKGBUILD +++ b/BioArchLinux/r-cubature/PKGBUILD @@ -9,7 +9,7 @@ pkgrel=1 pkgdesc="Adaptive Multivariate Integration over Hypercubes" arch=(x86_64) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-rcpp ) diff --git a/BioArchLinux/r-cytomem/PKGBUILD b/BioArchLinux/r-cytomem/PKGBUILD index 553ab2d117..ec95fb55d3 100644 --- a/BioArchLinux/r-cytomem/PKGBUILD +++ b/BioArchLinux/r-cytomem/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Marker Enrichment Modeling (MEM)" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-flowcore r-gplots diff --git a/BioArchLinux/r-cytopipeline/PKGBUILD b/BioArchLinux/r-cytopipeline/PKGBUILD index 738f0564f1..d87b6e6dba 100644 --- a/BioArchLinux/r-cytopipeline/PKGBUILD +++ b/BioArchLinux/r-cytopipeline/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=1 pkgdesc="Automation and visualization of flow cytometry data analysis pipelines" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-biocfilecache r-biocparallel diff --git a/BioArchLinux/r-cytoviewer/PKGBUILD b/BioArchLinux/r-cytoviewer/PKGBUILD index 84422be8b9..8e393c29ea 100644 --- a/BioArchLinux/r-cytoviewer/PKGBUILD +++ b/BioArchLinux/r-cytoviewer/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=1 pkgdesc="An interactive multi-channel image viewer for R" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-archive r-colourpicker diff --git a/BioArchLinux/r-delayedrandomarray/PKGBUILD b/BioArchLinux/r-delayedrandomarray/PKGBUILD index 1754610429..d52b64eaf0 100644 --- a/BioArchLinux/r-delayedrandomarray/PKGBUILD +++ b/BioArchLinux/r-delayedrandomarray/PKGBUILD @@ -9,7 +9,7 @@ pkgrel=1 pkgdesc="Delayed Arrays of Random Values" arch=(x86_64) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-delayedarray r-dqrng diff --git a/BioArchLinux/r-demuxsnp/PKGBUILD b/BioArchLinux/r-demuxsnp/PKGBUILD index b45c35d9b9..90dbc440ea 100644 --- a/BioArchLinux/r-demuxsnp/PKGBUILD +++ b/BioArchLinux/r-demuxsnp/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="scRNAseq demultiplexing using cell hashing and SNPs" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-biocgenerics r-combinat diff --git a/BioArchLinux/r-depinfer/PKGBUILD b/BioArchLinux/r-depinfer/PKGBUILD index b59e3348cf..04610a337c 100644 --- a/BioArchLinux/r-depinfer/PKGBUILD +++ b/BioArchLinux/r-depinfer/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Inferring tumor-specific cancer dependencies through integrating ex-vivo drug response assays and drug-protein profiling" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-biocparallel r-glmnet diff --git a/BioArchLinux/r-despace/PKGBUILD b/BioArchLinux/r-despace/PKGBUILD index f16a95de9f..1b67933c33 100644 --- a/BioArchLinux/r-despace/PKGBUILD +++ b/BioArchLinux/r-despace/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="a framework to discover spatially variable genes" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-assertthat r-biocgenerics diff --git a/BioArchLinux/r-dgeobj.utils/PKGBUILD b/BioArchLinux/r-dgeobj.utils/PKGBUILD index 1b5033d211..93c2a9012a 100644 --- a/BioArchLinux/r-dgeobj.utils/PKGBUILD +++ b/BioArchLinux/r-dgeobj.utils/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Differential Gene Expression (DGE) Analysis Utility Toolkit" arch=(any) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-assertthat r-dgeobj diff --git a/BioArchLinux/r-dgeobj/PKGBUILD b/BioArchLinux/r-dgeobj/PKGBUILD index cf018a0213..810734dfc6 100644 --- a/BioArchLinux/r-dgeobj/PKGBUILD +++ b/BioArchLinux/r-dgeobj/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Differential Gene Expression (DGE) Analysis Results Data Object" arch=(any) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-assertthat r-magrittr diff --git a/BioArchLinux/r-dicedesign/PKGBUILD b/BioArchLinux/r-dicedesign/PKGBUILD index 70c60ec69e..ce415491bb 100644 --- a/BioArchLinux/r-dicedesign/PKGBUILD +++ b/BioArchLinux/r-dicedesign/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=1 pkgdesc="Designs of Computer Experiments" arch=(x86_64) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r ) diff --git a/BioArchLinux/r-differentialregulation/PKGBUILD b/BioArchLinux/r-differentialregulation/PKGBUILD index 8fda49e305..6e50085e5c 100644 --- a/BioArchLinux/r-differentialregulation/PKGBUILD +++ b/BioArchLinux/r-differentialregulation/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Differentially regulated genes from scRNA-seq data" arch=(x86_64) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( blas lapack diff --git a/BioArchLinux/r-diffusionmap/PKGBUILD b/BioArchLinux/r-diffusionmap/PKGBUILD index 6bf658975d..e614c6d993 100644 --- a/BioArchLinux/r-diffusionmap/PKGBUILD +++ b/BioArchLinux/r-diffusionmap/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Diffusion Map" arch=(any) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-igraph r-scatterplot3d diff --git a/BioArchLinux/r-diffustats/PKGBUILD b/BioArchLinux/r-diffustats/PKGBUILD index ccdc04472c..18da7fff83 100644 --- a/BioArchLinux/r-diffustats/PKGBUILD +++ b/BioArchLinux/r-diffustats/PKGBUILD @@ -9,7 +9,7 @@ pkgrel=2 pkgdesc="Diffusion scores on biological networks" arch=(x86_64) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-checkmate r-expm diff --git a/BioArchLinux/r-directpa/PKGBUILD b/BioArchLinux/r-directpa/PKGBUILD index 59df738a39..6869e0d3fa 100644 --- a/BioArchLinux/r-directpa/PKGBUILD +++ b/BioArchLinux/r-directpa/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Direction Analysis for Pathways and Kinases" arch=(any) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-calibrate r-plotly diff --git a/BioArchLinux/r-dixontest/PKGBUILD b/BioArchLinux/r-dixontest/PKGBUILD index 888559991f..34710a6b05 100644 --- a/BioArchLinux/r-dixontest/PKGBUILD +++ b/BioArchLinux/r-dixontest/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=3 pkgdesc="Dixon's Ratio Test for Outlier Detection" arch=(x86_64) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r ) diff --git a/BioArchLinux/r-dnafusion/PKGBUILD b/BioArchLinux/r-dnafusion/PKGBUILD index 547f6bdb1c..5acce52f6a 100644 --- a/BioArchLinux/r-dnafusion/PKGBUILD +++ b/BioArchLinux/r-dnafusion/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Identification of gene fusions using paired-end sequencing" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-bamsignals r-biocbaseutils diff --git a/BioArchLinux/r-doubletrouble/PKGBUILD b/BioArchLinux/r-doubletrouble/PKGBUILD index 21868d7414..e907ef1ccc 100644 --- a/BioArchLinux/r-doubletrouble/PKGBUILD +++ b/BioArchLinux/r-doubletrouble/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=1 pkgdesc="Identification and classification of duplicated genes" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-annotationdbi r-biostrings diff --git a/BioArchLinux/r-dreamerr/PKGBUILD b/BioArchLinux/r-dreamerr/PKGBUILD index 5074e59099..6fab9990ca 100644 --- a/BioArchLinux/r-dreamerr/PKGBUILD +++ b/BioArchLinux/r-dreamerr/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=1 pkgdesc="Error Handling Made Easy" arch=(any) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-formula r-stringmagic diff --git a/BioArchLinux/r-edirquery/PKGBUILD b/BioArchLinux/r-edirquery/PKGBUILD index 3c3bbc4b31..68be569718 100644 --- a/BioArchLinux/r-edirquery/PKGBUILD +++ b/BioArchLinux/r-edirquery/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=1 pkgdesc="Query the EDIR Database For Specific Gene" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-genomicranges r-interactionset diff --git a/BioArchLinux/r-epimix.data/PKGBUILD b/BioArchLinux/r-epimix.data/PKGBUILD index 991e041faf..9aad823a0a 100644 --- a/BioArchLinux/r-epimix.data/PKGBUILD +++ b/BioArchLinux/r-epimix.data/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Data for the EpiMix package" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-experimenthub ) diff --git a/BioArchLinux/r-epimix/PKGBUILD b/BioArchLinux/r-epimix/PKGBUILD index b9283e2d27..7916e84eb7 100644 --- a/BioArchLinux/r-epimix/PKGBUILD +++ b/BioArchLinux/r-epimix/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=3 pkgdesc="an integrative tool for the population-level analysis of DNA methylation" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-annotationdbi r-annotationhub diff --git a/BioArchLinux/r-epistasisga/PKGBUILD b/BioArchLinux/r-epistasisga/PKGBUILD index 6bf7cc3866..87dedcbd86 100644 --- a/BioArchLinux/r-epistasisga/PKGBUILD +++ b/BioArchLinux/r-epistasisga/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="An R package to identify multi-snp effects in nuclear family studies using the GADGETS method" arch=(x86_64) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( blas lapack diff --git a/BioArchLinux/r-exact2x2/PKGBUILD b/BioArchLinux/r-exact2x2/PKGBUILD index d998cbfe69..371e89930e 100644 --- a/BioArchLinux/r-exact2x2/PKGBUILD +++ b/BioArchLinux/r-exact2x2/PKGBUILD @@ -9,7 +9,7 @@ pkgrel=4 pkgdesc="Exact Tests and Confidence Intervals for 2x2 Tables" arch=(any) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-exactci r-ssanv diff --git a/BioArchLinux/r-exactci/PKGBUILD b/BioArchLinux/r-exactci/PKGBUILD index 92b7da1b4d..7d307a73fa 100644 --- a/BioArchLinux/r-exactci/PKGBUILD +++ b/BioArchLinux/r-exactci/PKGBUILD @@ -9,7 +9,7 @@ pkgrel=4 pkgdesc="Exact P-Values and Matching Confidence Intervals for Simple Discrete Parametric Cases" arch=(any) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-ssanv r-testthat diff --git a/BioArchLinux/r-extrachips/PKGBUILD b/BioArchLinux/r-extrachips/PKGBUILD index 9b63b12be0..284868bbfd 100644 --- a/BioArchLinux/r-extrachips/PKGBUILD +++ b/BioArchLinux/r-extrachips/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Additional functions for working with ChIP-Seq data" arch=(x86_64) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-biocio r-biocparallel diff --git a/BioArchLinux/r-eztune/PKGBUILD b/BioArchLinux/r-eztune/PKGBUILD index b311869311..3833c0a868 100644 --- a/BioArchLinux/r-eztune/PKGBUILD +++ b/BioArchLinux/r-eztune/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=3 pkgdesc="Tunes AdaBoost, Elastic Net, Support Vector Machines, and Gradient Boosting Machines" arch=(any) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-ada r-biocstyle diff --git a/BioArchLinux/r-fcps/PKGBUILD b/BioArchLinux/r-fcps/PKGBUILD index d7adf39c8e..3a3feddd39 100644 --- a/BioArchLinux/r-fcps/PKGBUILD +++ b/BioArchLinux/r-fcps/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Fundamental Clustering Problems Suite" arch=(any) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( pandoc r-datavisualizations diff --git a/BioArchLinux/r-featseekr/PKGBUILD b/BioArchLinux/r-featseekr/PKGBUILD index f7bc9bc57d..93821964d0 100644 --- a/BioArchLinux/r-featseekr/PKGBUILD +++ b/BioArchLinux/r-featseekr/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="an R package for unsupervised feature selection" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-pheatmap r-pracma diff --git a/BioArchLinux/r-fixest/PKGBUILD b/BioArchLinux/r-fixest/PKGBUILD index 715c47080d..059ba73a21 100644 --- a/BioArchLinux/r-fixest/PKGBUILD +++ b/BioArchLinux/r-fixest/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=1 pkgdesc="Fast Fixed-Effects Estimations" arch=(x86_64) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-dreamerr r-numderiv diff --git a/BioArchLinux/r-flatxml/PKGBUILD b/BioArchLinux/r-flatxml/PKGBUILD index 603a56ac90..ca677dcd1b 100644 --- a/BioArchLinux/r-flatxml/PKGBUILD +++ b/BioArchLinux/r-flatxml/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Tools for Working with XML Files as R Dataframes" arch=(any) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-crayon r-httr diff --git a/BioArchLinux/r-geoexplorer/PKGBUILD b/BioArchLinux/r-geoexplorer/PKGBUILD index 9f8b1a46c3..7bd2730d68 100644 --- a/BioArchLinux/r-geoexplorer/PKGBUILD +++ b/BioArchLinux/r-geoexplorer/PKGBUILD @@ -9,7 +9,7 @@ pkgrel=2 pkgdesc="a webserver for gene expression analysis and visualisation" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-biobase r-car diff --git a/BioArchLinux/r-ggvenndiagram/PKGBUILD b/BioArchLinux/r-ggvenndiagram/PKGBUILD index 82ab38aff4..da92ace07e 100644 --- a/BioArchLinux/r-ggvenndiagram/PKGBUILD +++ b/BioArchLinux/r-ggvenndiagram/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=1 pkgdesc="A 'ggplot2' Implement of Venn Diagram" arch=(any) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-aplot r-dplyr diff --git a/BioArchLinux/r-ggwordcloud/PKGBUILD b/BioArchLinux/r-ggwordcloud/PKGBUILD index ca6792c597..b0fb55c81a 100644 --- a/BioArchLinux/r-ggwordcloud/PKGBUILD +++ b/BioArchLinux/r-ggwordcloud/PKGBUILD @@ -9,7 +9,7 @@ pkgrel=1 pkgdesc="A Word Cloud Geom for 'ggplot2'" arch=(x86_64) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-colorspace r-ggplot2 diff --git a/BioArchLinux/r-gopro/PKGBUILD b/BioArchLinux/r-gopro/PKGBUILD index 933c635a5a..10b8ae02f4 100644 --- a/BioArchLinux/r-gopro/PKGBUILD +++ b/BioArchLinux/r-gopro/PKGBUILD @@ -9,7 +9,7 @@ pkgrel=1 pkgdesc="Find the most characteristic gene ontology terms for groups of human genes" arch=(x86_64) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-annotationdbi r-dendextend diff --git a/BioArchLinux/r-gosorensen/PKGBUILD b/BioArchLinux/r-gosorensen/PKGBUILD index 9fa423d47a..94a6f9c04e 100644 --- a/BioArchLinux/r-gosorensen/PKGBUILD +++ b/BioArchLinux/r-gosorensen/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Statistical inference based on the Sorensen-Dice dissimilarity and the Gene Ontology (GO)" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-clusterprofiler r-go.db diff --git a/BioArchLinux/r-gower/PKGBUILD b/BioArchLinux/r-gower/PKGBUILD index 82c5f5f36f..235df8d33c 100644 --- a/BioArchLinux/r-gower/PKGBUILD +++ b/BioArchLinux/r-gower/PKGBUILD @@ -11,7 +11,7 @@ pkgrel=3 pkgdesc="Gower's Distance" arch=(x86_64) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r ) diff --git a/BioArchLinux/r-gsl/PKGBUILD b/BioArchLinux/r-gsl/PKGBUILD index d0256ff34d..6a189e6d3d 100644 --- a/BioArchLinux/r-gsl/PKGBUILD +++ b/BioArchLinux/r-gsl/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=4 pkgdesc="Wrapper for the Gnu Scientific Library" arch=(x86_64) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( gsl r diff --git a/BioArchLinux/r-gunifrac/PKGBUILD b/BioArchLinux/r-gunifrac/PKGBUILD index 1ca7490411..8d943a3301 100644 --- a/BioArchLinux/r-gunifrac/PKGBUILD +++ b/BioArchLinux/r-gunifrac/PKGBUILD @@ -9,7 +9,7 @@ pkgrel=1 pkgdesc="Generalized UniFrac Distances, Distance-Based Multivariate Methods and Feature-Based Univariate Methods for Microbiome Data Analysis" arch=(x86_64) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-ape r-dirmult diff --git a/BioArchLinux/r-harmonizr/PKGBUILD b/BioArchLinux/r-harmonizr/PKGBUILD index 9e86e3db17..52d36684fe 100644 --- a/BioArchLinux/r-harmonizr/PKGBUILD +++ b/BioArchLinux/r-harmonizr/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Handles missing values and makes more data available" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-doparallel r-foreach diff --git a/BioArchLinux/r-harmony/PKGBUILD b/BioArchLinux/r-harmony/PKGBUILD index d08bd0c7f3..6135c7e8a5 100644 --- a/BioArchLinux/r-harmony/PKGBUILD +++ b/BioArchLinux/r-harmony/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=1 pkgdesc="Fast, Sensitive, and Accurate Integration of Single Cell Data" arch=(x86_64) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( blas lapack diff --git a/BioArchLinux/r-herper/PKGBUILD b/BioArchLinux/r-herper/PKGBUILD index 00bba4a6e2..a679c1afac 100644 --- a/BioArchLinux/r-herper/PKGBUILD +++ b/BioArchLinux/r-herper/PKGBUILD @@ -9,7 +9,7 @@ pkgrel=1 pkgdesc="The Herper package is a simple toolset to install and manage conda packages and environments from R" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-reticulate r-rjson diff --git a/BioArchLinux/r-hibag/PKGBUILD b/BioArchLinux/r-hibag/PKGBUILD index 43beb1650e..1b247f339e 100644 --- a/BioArchLinux/r-hibag/PKGBUILD +++ b/BioArchLinux/r-hibag/PKGBUILD @@ -9,7 +9,7 @@ pkgrel=1 pkgdesc="HLA Genotype Imputation with Attribute Bagging" arch=(x86_64) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-rcppparallel ) diff --git a/BioArchLinux/r-hicvenndiagram/PKGBUILD b/BioArchLinux/r-hicvenndiagram/PKGBUILD index 254997771a..1de5b0797f 100644 --- a/BioArchLinux/r-hicvenndiagram/PKGBUILD +++ b/BioArchLinux/r-hicvenndiagram/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Venn Diagram for genomic interaction data" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-complexupset r-eulerr diff --git a/BioArchLinux/r-ibreakdown/PKGBUILD b/BioArchLinux/r-ibreakdown/PKGBUILD index f8deeded5c..a8488c4c9a 100644 --- a/BioArchLinux/r-ibreakdown/PKGBUILD +++ b/BioArchLinux/r-ibreakdown/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Model Agnostic Instance Level Variable Attributions" arch=(any) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-ggplot2 ) diff --git a/BioArchLinux/r-illumina450probevariants.db/PKGBUILD b/BioArchLinux/r-illumina450probevariants.db/PKGBUILD index f17a8c34da..277ac3c3e6 100644 --- a/BioArchLinux/r-illumina450probevariants.db/PKGBUILD +++ b/BioArchLinux/r-illumina450probevariants.db/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Annotation Package combining variant data from 1000 Genomes Project for Illumina HumanMethylation450 Bead Chip probes" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r ) diff --git a/BioArchLinux/r-inetgrate/PKGBUILD b/BioArchLinux/r-inetgrate/PKGBUILD index d2ca841f3f..1880eef0cc 100644 --- a/BioArchLinux/r-inetgrate/PKGBUILD +++ b/BioArchLinux/r-inetgrate/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Integrates DNA methylation data with gene expression in a single gene network" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-biocstyle r-caret diff --git a/BioArchLinux/r-ingredients/PKGBUILD b/BioArchLinux/r-ingredients/PKGBUILD index 8e3e805a02..c332a3529e 100644 --- a/BioArchLinux/r-ingredients/PKGBUILD +++ b/BioArchLinux/r-ingredients/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Effects and Importances of Model Ingredients" arch=(any) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-ggplot2 r-gridextra diff --git a/BioArchLinux/r-ini/PKGBUILD b/BioArchLinux/r-ini/PKGBUILD index 04533f4e76..88e3cd792b 100644 --- a/BioArchLinux/r-ini/PKGBUILD +++ b/BioArchLinux/r-ini/PKGBUILD @@ -9,7 +9,7 @@ pkgrel=12 pkgdesc="Read and Write '.ini' Files" arch=(any) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r ) diff --git a/BioArchLinux/r-insight/PKGBUILD b/BioArchLinux/r-insight/PKGBUILD index 6a532b2fb0..8daa820f61 100644 --- a/BioArchLinux/r-insight/PKGBUILD +++ b/BioArchLinux/r-insight/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Easy Access to Model Information for Various Model Objects" arch=(any) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r ) diff --git a/BioArchLinux/r-intomics/PKGBUILD b/BioArchLinux/r-intomics/PKGBUILD index a5d54fd541..4f28444371 100644 --- a/BioArchLinux/r-intomics/PKGBUILD +++ b/BioArchLinux/r-intomics/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=1 pkgdesc="Integrative analysis of multi-omics data to infer regulatory networks" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-bestnormalize r-bnlearn diff --git a/BioArchLinux/r-irlba/PKGBUILD b/BioArchLinux/r-irlba/PKGBUILD index 68f86f6d04..6598e24827 100644 --- a/BioArchLinux/r-irlba/PKGBUILD +++ b/BioArchLinux/r-irlba/PKGBUILD @@ -11,7 +11,7 @@ pkgrel=5 pkgdesc="Fast Truncated Singular Value Decomposition and Principal Components Analysis for Large Dense and Sparse Matrices" arch=(x86_64) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( blas lapack diff --git a/BioArchLinux/r-isobayes/PKGBUILD b/BioArchLinux/r-isobayes/PKGBUILD index 77a9b9ca54..3d0ede1d22 100644 --- a/BioArchLinux/r-isobayes/PKGBUILD +++ b/BioArchLinux/r-isobayes/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=3 pkgdesc="Single Isoform protein inference Method via Bayesian Analyses" arch=(x86_64) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-data.table r-doparallel diff --git a/BioArchLinux/r-kit/PKGBUILD b/BioArchLinux/r-kit/PKGBUILD index e79704c8a8..0dca0a37ed 100644 --- a/BioArchLinux/r-kit/PKGBUILD +++ b/BioArchLinux/r-kit/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Data Manipulation Functions Implemented in C" arch=(x86_64) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r ) diff --git a/BioArchLinux/r-lazyeval/PKGBUILD b/BioArchLinux/r-lazyeval/PKGBUILD index 2b9fdce79b..8d4ab76c05 100644 --- a/BioArchLinux/r-lazyeval/PKGBUILD +++ b/BioArchLinux/r-lazyeval/PKGBUILD @@ -14,7 +14,7 @@ pkgrel=10 pkgdesc="Lazy (Non-Standard) Evaluation" arch=(x86_64) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r ) diff --git a/BioArchLinux/r-logging/PKGBUILD b/BioArchLinux/r-logging/PKGBUILD index 97404ac5b8..4184c5c166 100644 --- a/BioArchLinux/r-logging/PKGBUILD +++ b/BioArchLinux/r-logging/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=9 pkgdesc="R Logging Package" arch=(any) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r ) diff --git a/BioArchLinux/r-magrene/PKGBUILD b/BioArchLinux/r-magrene/PKGBUILD index 1dfcb0a576..43e320178e 100644 --- a/BioArchLinux/r-magrene/PKGBUILD +++ b/BioArchLinux/r-magrene/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Motif Analysis In Gene Regulatory Networks" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-biocparallel ) diff --git a/BioArchLinux/r-mariner/PKGBUILD b/BioArchLinux/r-mariner/PKGBUILD index 3e45bf8980..beef300cb5 100644 --- a/BioArchLinux/r-mariner/PKGBUILD +++ b/BioArchLinux/r-mariner/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Explore the Hi-Cs" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-abind r-assertthat diff --git a/BioArchLinux/r-marinerdata/PKGBUILD b/BioArchLinux/r-marinerdata/PKGBUILD index 0ba626a63b..b602fb05d7 100644 --- a/BioArchLinux/r-marinerdata/PKGBUILD +++ b/BioArchLinux/r-marinerdata/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=1 pkgdesc="ExperimentHub data for the mariner package" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-experimenthub ) diff --git a/BioArchLinux/r-metabma/PKGBUILD b/BioArchLinux/r-metabma/PKGBUILD index 8924cfc571..581f248441 100644 --- a/BioArchLinux/r-metabma/PKGBUILD +++ b/BioArchLinux/r-metabma/PKGBUILD @@ -9,7 +9,7 @@ pkgrel=2 pkgdesc="Bayesian Model Averaging for Random and Fixed Effects Meta-Analysis" arch=(x86_64) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-bridgesampling r-coda diff --git a/BioArchLinux/r-metavolcanor/PKGBUILD b/BioArchLinux/r-metavolcanor/PKGBUILD index 5d856f175c..f219ff84f6 100644 --- a/BioArchLinux/r-metavolcanor/PKGBUILD +++ b/BioArchLinux/r-metavolcanor/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=3 pkgdesc="Gene Expression Meta-analysis Visualization Tool" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-cowplot r-data.table diff --git a/BioArchLinux/r-microbiomestat/PKGBUILD b/BioArchLinux/r-microbiomestat/PKGBUILD index 7271af2cbf..6ba7cad8d3 100644 --- a/BioArchLinux/r-microbiomestat/PKGBUILD +++ b/BioArchLinux/r-microbiomestat/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Statistical Methods for Microbiome Compositional Data" arch=(any) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-foreach r-ggplot2 diff --git a/BioArchLinux/r-microstasis/PKGBUILD b/BioArchLinux/r-microstasis/PKGBUILD index b113090152..2c05344f09 100644 --- a/BioArchLinux/r-microstasis/PKGBUILD +++ b/BioArchLinux/r-microstasis/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Microbiota STability ASsessment via Iterative cluStering" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-biocparallel r-ggplot2 diff --git a/BioArchLinux/r-micsqtl/PKGBUILD b/BioArchLinux/r-micsqtl/PKGBUILD index fd3de04ffb..66103a3d74 100644 --- a/BioArchLinux/r-micsqtl/PKGBUILD +++ b/BioArchLinux/r-micsqtl/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=3 pkgdesc="Multi-omic deconvolution, Integration and Cell-type-specific Quantitative Trait Loci" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-biocparallel r-dirmult diff --git a/BioArchLinux/r-mockr/PKGBUILD b/BioArchLinux/r-mockr/PKGBUILD index f2fcda043b..3acf9e03fc 100644 --- a/BioArchLinux/r-mockr/PKGBUILD +++ b/BioArchLinux/r-mockr/PKGBUILD @@ -9,7 +9,7 @@ pkgrel=2 pkgdesc="Mocking in R" arch=(any) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-rlang r-withr diff --git a/BioArchLinux/r-modelr/PKGBUILD b/BioArchLinux/r-modelr/PKGBUILD index eeacec8b9c..bf7ee95ce4 100644 --- a/BioArchLinux/r-modelr/PKGBUILD +++ b/BioArchLinux/r-modelr/PKGBUILD @@ -11,7 +11,7 @@ pkgrel=4 pkgdesc="Modelling Functions that Work with the Pipe" arch=(any) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-broom r-magrittr diff --git a/BioArchLinux/r-moonlight2r/PKGBUILD b/BioArchLinux/r-moonlight2r/PKGBUILD index c0b257195b..333ecc895a 100644 --- a/BioArchLinux/r-moonlight2r/PKGBUILD +++ b/BioArchLinux/r-moonlight2r/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Identify oncogenes and tumor suppressor genes from omics data" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-annotationhub r-biobase diff --git a/BioArchLinux/r-mslp/PKGBUILD b/BioArchLinux/r-mslp/PKGBUILD index ed96f3b913..1e519e919f 100644 --- a/BioArchLinux/r-mslp/PKGBUILD +++ b/BioArchLinux/r-mslp/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Predict synthetic lethal partners of tumour mutations" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-data.table r-dorng diff --git a/BioArchLinux/r-msquality/PKGBUILD b/BioArchLinux/r-msquality/PKGBUILD index 323d8d296e..ae96060055 100644 --- a/BioArchLinux/r-msquality/PKGBUILD +++ b/BioArchLinux/r-msquality/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=3 pkgdesc="Quality metric calculation from Spectra and MsExperiment objects" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-biocparallel r-ggplot2 diff --git a/BioArchLinux/r-mudata/PKGBUILD b/BioArchLinux/r-mudata/PKGBUILD index 4f9677127f..5ec23fd32e 100644 --- a/BioArchLinux/r-mudata/PKGBUILD +++ b/BioArchLinux/r-mudata/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Serialization for MultiAssayExperiment Objects" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-delayedarray r-multiassayexperiment diff --git a/BioArchLinux/r-multiwgcna/PKGBUILD b/BioArchLinux/r-multiwgcna/PKGBUILD index 033f53e213..8b2af45019 100644 --- a/BioArchLinux/r-multiwgcna/PKGBUILD +++ b/BioArchLinux/r-multiwgcna/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=3 pkgdesc="An R package for deeping mining gene co-expression networks in multi-trait expression data" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-cowplot r-data.table diff --git a/BioArchLinux/r-ncigraph/PKGBUILD b/BioArchLinux/r-ncigraph/PKGBUILD index 358b2e9ca2..6f9d3e0f8f 100644 --- a/BioArchLinux/r-ncigraph/PKGBUILD +++ b/BioArchLinux/r-ncigraph/PKGBUILD @@ -9,7 +9,7 @@ pkgrel=2 pkgdesc="Pathways from the NCI Pathways Database" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-graph r-kegggraph diff --git a/BioArchLinux/r-ncmeta/PKGBUILD b/BioArchLinux/r-ncmeta/PKGBUILD index 4ce1fad7ef..b11aa5ed74 100644 --- a/BioArchLinux/r-ncmeta/PKGBUILD +++ b/BioArchLinux/r-ncmeta/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=1 pkgdesc="Straightforward 'NetCDF' Metadata" arch=(any) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-dplyr r-rlang diff --git a/BioArchLinux/r-netboost/PKGBUILD b/BioArchLinux/r-netboost/PKGBUILD index 30218702eb..dd89657b3d 100644 --- a/BioArchLinux/r-netboost/PKGBUILD +++ b/BioArchLinux/r-netboost/PKGBUILD @@ -9,7 +9,7 @@ pkgrel=4 pkgdesc="Network Analysis Supported by Boosting" arch=(x86_64) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( bash gzip diff --git a/BioArchLinux/r-netzoor/PKGBUILD b/BioArchLinux/r-netzoor/PKGBUILD index 015822143e..ebd5fb645c 100644 --- a/BioArchLinux/r-netzoor/PKGBUILD +++ b/BioArchLinux/r-netzoor/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Unified methods for the inference and analysis of gene regulatory networks" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-annotationdbi r-assertthat diff --git a/BioArchLinux/r-nipalsmcia/PKGBUILD b/BioArchLinux/r-nipalsmcia/PKGBUILD index 1c4968f7fd..8e0d735558 100644 --- a/BioArchLinux/r-nipalsmcia/PKGBUILD +++ b/BioArchLinux/r-nipalsmcia/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Multiple Co-Inertia Analysis via the NIPALS Method" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-complexheatmap r-dplyr diff --git a/BioArchLinux/r-nullrangesdata/PKGBUILD b/BioArchLinux/r-nullrangesdata/PKGBUILD index 55731b3c5c..a286817c40 100644 --- a/BioArchLinux/r-nullrangesdata/PKGBUILD +++ b/BioArchLinux/r-nullrangesdata/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="ExperimentHub datasets for the nullranges package" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-experimenthub r-genomicranges diff --git a/BioArchLinux/r-oaqc/PKGBUILD b/BioArchLinux/r-oaqc/PKGBUILD index e8e0b770b7..7af04332fb 100644 --- a/BioArchLinux/r-oaqc/PKGBUILD +++ b/BioArchLinux/r-oaqc/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Computation of the Orbit-Aware Quad Census" arch=(x86_64) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r ) diff --git a/BioArchLinux/r-omada/PKGBUILD b/BioArchLinux/r-omada/PKGBUILD index 1ddf538ce0..44d857613a 100644 --- a/BioArchLinux/r-omada/PKGBUILD +++ b/BioArchLinux/r-omada/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Machine learning tools for automated transcriptome clustering analysis" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-clvalid r-dicer diff --git a/BioArchLinux/r-paletteer/PKGBUILD b/BioArchLinux/r-paletteer/PKGBUILD index 93aec1741b..d8eecb49d2 100644 --- a/BioArchLinux/r-paletteer/PKGBUILD +++ b/BioArchLinux/r-paletteer/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Comprehensive Collection of Color Palettes" arch=(any) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-prismatic r-rematch2 diff --git a/BioArchLinux/r-palr/PKGBUILD b/BioArchLinux/r-palr/PKGBUILD index 073c8ef932..bb5f7ba18f 100644 --- a/BioArchLinux/r-palr/PKGBUILD +++ b/BioArchLinux/r-palr/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=1 pkgdesc="Colour Palettes for Data" arch=(any) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r ) diff --git a/BioArchLinux/r-pan/PKGBUILD b/BioArchLinux/r-pan/PKGBUILD index 7c2a562dfa..6564a38028 100644 --- a/BioArchLinux/r-pan/PKGBUILD +++ b/BioArchLinux/r-pan/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Multiple Imputation for Multivariate Panel or Clustered Data" arch=(x86_64) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r ) diff --git a/BioArchLinux/r-pbdzmq/PKGBUILD b/BioArchLinux/r-pbdzmq/PKGBUILD index 0e9cb3dc2b..e1c5129757 100644 --- a/BioArchLinux/r-pbdzmq/PKGBUILD +++ b/BioArchLinux/r-pbdzmq/PKGBUILD @@ -10,7 +10,7 @@ pkgrel=1 pkgdesc="Programming with Big Data -- Interface to 'ZeroMQ'" arch=(x86_64) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r zeromq diff --git a/BioArchLinux/r-performance/PKGBUILD b/BioArchLinux/r-performance/PKGBUILD index 47daba7212..ccb6c8880b 100644 --- a/BioArchLinux/r-performance/PKGBUILD +++ b/BioArchLinux/r-performance/PKGBUILD @@ -9,7 +9,7 @@ pkgrel=1 pkgdesc="Assessment of Regression Models Performance" arch=(any) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-bayestestr r-datawizard diff --git a/BioArchLinux/r-pkgload/PKGBUILD b/BioArchLinux/r-pkgload/PKGBUILD index 28fac1c7c1..4d61627569 100644 --- a/BioArchLinux/r-pkgload/PKGBUILD +++ b/BioArchLinux/r-pkgload/PKGBUILD @@ -12,7 +12,7 @@ pkgrel=1 pkgdesc="Simulate Package Installation and Attach" arch=(any) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-cli r-crayon diff --git a/BioArchLinux/r-ppcseq/PKGBUILD b/BioArchLinux/r-ppcseq/PKGBUILD index 02b32d19d4..6a1fbe386f 100644 --- a/BioArchLinux/r-ppcseq/PKGBUILD +++ b/BioArchLinux/r-ppcseq/PKGBUILD @@ -9,7 +9,7 @@ pkgrel=4 pkgdesc="Probabilistic Outlier Identification for RNA Sequencing Generalized Linear Models" arch=(x86_64) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-benchmarkme r-dplyr diff --git a/BioArchLinux/r-protgear/PKGBUILD b/BioArchLinux/r-protgear/PKGBUILD index be87c45f86..917ef69c1e 100644 --- a/BioArchLinux/r-protgear/PKGBUILD +++ b/BioArchLinux/r-protgear/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Protein Micro Array Data Management and Interactive Visualization" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-biobase r-data.table diff --git a/BioArchLinux/r-proxyc/PKGBUILD b/BioArchLinux/r-proxyc/PKGBUILD index 77b758ddc3..adddc1a7ae 100644 --- a/BioArchLinux/r-proxyc/PKGBUILD +++ b/BioArchLinux/r-proxyc/PKGBUILD @@ -9,7 +9,7 @@ pkgrel=2 pkgdesc="Computes Proximity in Large Sparse Matrices" arch=(x86_64) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( blas r-rcpp diff --git a/BioArchLinux/r-qmtools/PKGBUILD b/BioArchLinux/r-qmtools/PKGBUILD index 9b2e58182c..bcb5cdb84b 100644 --- a/BioArchLinux/r-qmtools/PKGBUILD +++ b/BioArchLinux/r-qmtools/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Quantitative Metabolomics Data Processing Tools" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-ggplot2 r-heatmaply diff --git a/BioArchLinux/r-qtlexperiment/PKGBUILD b/BioArchLinux/r-qtlexperiment/PKGBUILD index 3821ddd950..84b3044aa7 100644 --- a/BioArchLinux/r-qtlexperiment/PKGBUILD +++ b/BioArchLinux/r-qtlexperiment/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="S4 classes for QTL summary statistics and metadata" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-ashr r-biocgenerics diff --git a/BioArchLinux/r-quanteda/PKGBUILD b/BioArchLinux/r-quanteda/PKGBUILD index da57749fc4..5fc3d7f27d 100644 --- a/BioArchLinux/r-quanteda/PKGBUILD +++ b/BioArchLinux/r-quanteda/PKGBUILD @@ -9,7 +9,7 @@ pkgrel=2 pkgdesc="Quantitative Analysis of Textual Data" arch=(x86_64) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-fastmatch r-jsonlite diff --git a/BioArchLinux/r-quantiseqr/PKGBUILD b/BioArchLinux/r-quantiseqr/PKGBUILD index 12e206638b..e091c5e0ff 100644 --- a/BioArchLinux/r-quantiseqr/PKGBUILD +++ b/BioArchLinux/r-quantiseqr/PKGBUILD @@ -9,7 +9,7 @@ pkgrel=1 pkgdesc="Quantification of the Tumor Immune contexture from RNA-seq data" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-biobase r-ggplot2 diff --git a/BioArchLinux/r-raresim/PKGBUILD b/BioArchLinux/r-raresim/PKGBUILD index 3c5e0b343a..48033965ac 100644 --- a/BioArchLinux/r-raresim/PKGBUILD +++ b/BioArchLinux/r-raresim/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Simulation of Rare Variant Genetic Data" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-nloptr ) diff --git a/BioArchLinux/r-readods/PKGBUILD b/BioArchLinux/r-readods/PKGBUILD index b0dd8d71de..f1f8287fa6 100644 --- a/BioArchLinux/r-readods/PKGBUILD +++ b/BioArchLinux/r-readods/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=3 pkgdesc="Read and Write ODS Files" arch=(x86_64) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-cellranger r-readr diff --git a/BioArchLinux/r-residualmatrix/PKGBUILD b/BioArchLinux/r-residualmatrix/PKGBUILD index 3544fffb86..15d49ff254 100644 --- a/BioArchLinux/r-residualmatrix/PKGBUILD +++ b/BioArchLinux/r-residualmatrix/PKGBUILD @@ -9,7 +9,7 @@ pkgrel=1 pkgdesc="Creating a DelayedMatrix of Regression Residuals" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-delayedarray r-s4vectors diff --git a/BioArchLinux/r-retrofit/PKGBUILD b/BioArchLinux/r-retrofit/PKGBUILD index f5af41ca2b..4f78c45971 100644 --- a/BioArchLinux/r-retrofit/PKGBUILD +++ b/BioArchLinux/r-retrofit/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=3 pkgdesc="Reference-free deconvolution of cell mixtures in spatial transcriptomics" arch=(x86_64) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-rcpp ) diff --git a/BioArchLinux/r-rmarkdown/PKGBUILD b/BioArchLinux/r-rmarkdown/PKGBUILD index 1f9d33972f..59e329cd81 100644 --- a/BioArchLinux/r-rmarkdown/PKGBUILD +++ b/BioArchLinux/r-rmarkdown/PKGBUILD @@ -14,7 +14,7 @@ pkgrel=1 pkgdesc="Dynamic Documents for R" arch=(any) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( pandoc r-bslib diff --git a/BioArchLinux/r-rmixmod/PKGBUILD b/BioArchLinux/r-rmixmod/PKGBUILD index a91e8fae7a..8f44f85e82 100644 --- a/BioArchLinux/r-rmixmod/PKGBUILD +++ b/BioArchLinux/r-rmixmod/PKGBUILD @@ -9,7 +9,7 @@ pkgrel=1 pkgdesc="Classification with Mixture Modelling" arch=(x86_64) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( glibmm libxml++2.6 diff --git a/BioArchLinux/r-rnaseqcovarimpute/PKGBUILD b/BioArchLinux/r-rnaseqcovarimpute/PKGBUILD index 0b0f147f86..2405b2fab8 100644 --- a/BioArchLinux/r-rnaseqcovarimpute/PKGBUILD +++ b/BioArchLinux/r-rnaseqcovarimpute/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Impute Covariate Data in RNA Sequencing Studies" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-biobase r-biocparallel diff --git a/BioArchLinux/r-roastgsa/PKGBUILD b/BioArchLinux/r-roastgsa/PKGBUILD index ec7f3f943a..f15c27fd66 100644 --- a/BioArchLinux/r-roastgsa/PKGBUILD +++ b/BioArchLinux/r-roastgsa/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Rotation based gene set analysis" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-biobase r-ggplot2 diff --git a/BioArchLinux/r-robtt/PKGBUILD b/BioArchLinux/r-robtt/PKGBUILD index 1d339d840e..a465eecf4e 100644 --- a/BioArchLinux/r-robtt/PKGBUILD +++ b/BioArchLinux/r-robtt/PKGBUILD @@ -9,7 +9,7 @@ pkgrel=2 pkgdesc="Robust Bayesian T-Test" arch=(x86_64) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-bayestools r-bridgesampling diff --git a/BioArchLinux/r-rolde/PKGBUILD b/BioArchLinux/r-rolde/PKGBUILD index 002ce34c3e..e4b0f64f4f 100644 --- a/BioArchLinux/r-rolde/PKGBUILD +++ b/BioArchLinux/r-rolde/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=3 pkgdesc="Robust longitudinal Differential Expression" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-doparallel r-dorng diff --git a/BioArchLinux/r-rpart.plot/PKGBUILD b/BioArchLinux/r-rpart.plot/PKGBUILD index 504b9c4dcb..7f892aa52e 100644 --- a/BioArchLinux/r-rpart.plot/PKGBUILD +++ b/BioArchLinux/r-rpart.plot/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=6 pkgdesc="Plot 'rpart' Models: An Enhanced Version of 'plot.rpart'" arch=(any) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r ) diff --git a/BioArchLinux/r-rprimer/PKGBUILD b/BioArchLinux/r-rprimer/PKGBUILD index d0935d45eb..8a978d78d0 100644 --- a/BioArchLinux/r-rprimer/PKGBUILD +++ b/BioArchLinux/r-rprimer/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Design Degenerate Oligos from a Multiple DNA Sequence Alignment" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-biostrings r-bslib diff --git a/BioArchLinux/r-rugarch/PKGBUILD b/BioArchLinux/r-rugarch/PKGBUILD index 6d4eeaaafb..7f4cd599bd 100644 --- a/BioArchLinux/r-rugarch/PKGBUILD +++ b/BioArchLinux/r-rugarch/PKGBUILD @@ -9,7 +9,7 @@ pkgrel=2 pkgdesc="Univariate GARCH Models" arch=(x86_64) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-chron r-ks diff --git a/BioArchLinux/r-sarc/PKGBUILD b/BioArchLinux/r-sarc/PKGBUILD index 9851b8b38c..c8701e4164 100644 --- a/BioArchLinux/r-sarc/PKGBUILD +++ b/BioArchLinux/r-sarc/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Statistical Analysis of Regions with CNVs" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-data.table r-desctools diff --git a/BioArchLinux/r-sccomp/PKGBUILD b/BioArchLinux/r-sccomp/PKGBUILD index 92e7c6d5c5..ddd0604433 100644 --- a/BioArchLinux/r-sccomp/PKGBUILD +++ b/BioArchLinux/r-sccomp/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Robust Outlier-aware Estimation of Composition and Heterogeneity for Single-cell Data" arch=(x86_64) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-dplyr r-forcats diff --git a/BioArchLinux/r-scfeatures/PKGBUILD b/BioArchLinux/r-scfeatures/PKGBUILD index 1df5ab0447..4e7ec7bc2d 100644 --- a/BioArchLinux/r-scfeatures/PKGBUILD +++ b/BioArchLinux/r-scfeatures/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=3 pkgdesc="Multi-view representations of single-cell and spatial data for disease outcome prediction" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-ape r-aucell diff --git a/BioArchLinux/r-scmet/PKGBUILD b/BioArchLinux/r-scmet/PKGBUILD index 81a146d807..04bcbf7e85 100644 --- a/BioArchLinux/r-scmet/PKGBUILD +++ b/BioArchLinux/r-scmet/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Bayesian modelling of cell-to-cell DNA methylation heterogeneity" arch=(x86_64) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-assertthat r-biocstyle diff --git a/BioArchLinux/r-scrnaseqapp/PKGBUILD b/BioArchLinux/r-scrnaseqapp/PKGBUILD index a17e5c8844..70d38026ce 100644 --- a/BioArchLinux/r-scrnaseqapp/PKGBUILD +++ b/BioArchLinux/r-scrnaseqapp/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="A single-cell RNAseq Shiny app-package" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-bibtex r-bslib diff --git a/BioArchLinux/r-scs/PKGBUILD b/BioArchLinux/r-scs/PKGBUILD index 94dd607a37..08e793c820 100644 --- a/BioArchLinux/r-scs/PKGBUILD +++ b/BioArchLinux/r-scs/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=3 pkgdesc="Splitting Conic Solver" arch=(x86_64) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( blas lapack diff --git a/BioArchLinux/r-seqarchrplus/PKGBUILD b/BioArchLinux/r-seqarchrplus/PKGBUILD index 354bd110ff..23f8931639 100644 --- a/BioArchLinux/r-seqarchrplus/PKGBUILD +++ b/BioArchLinux/r-seqarchrplus/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Downstream analyses of promoter sequence architectures and HTML report generation" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-biocparallel r-biostrings diff --git a/BioArchLinux/r-seriation/PKGBUILD b/BioArchLinux/r-seriation/PKGBUILD index 983332c1b0..6165a874ca 100644 --- a/BioArchLinux/r-seriation/PKGBUILD +++ b/BioArchLinux/r-seriation/PKGBUILD @@ -9,7 +9,7 @@ pkgrel=1 pkgdesc="Infrastructure for Ordering Objects Using Seriation" arch=(x86_64) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-ca r-colorspace diff --git a/BioArchLinux/r-sgcp/PKGBUILD b/BioArchLinux/r-sgcp/PKGBUILD index 1c02e16e20..7af117b6be 100644 --- a/BioArchLinux/r-sgcp/PKGBUILD +++ b/BioArchLinux/r-sgcp/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=3 pkgdesc="A semi-supervised pipeline for gene clustering using self-training approach in gene co-expression networks" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-annotate r-caret diff --git a/BioArchLinux/r-shinylogs/PKGBUILD b/BioArchLinux/r-shinylogs/PKGBUILD index 4b2be4671b..b6fe47b4ed 100644 --- a/BioArchLinux/r-shinylogs/PKGBUILD +++ b/BioArchLinux/r-shinylogs/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Record Everything that Happens in a 'Shiny' Application" arch=(any) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-anytime r-bit64 diff --git a/BioArchLinux/r-shinymanager/PKGBUILD b/BioArchLinux/r-shinymanager/PKGBUILD index 98056c0da0..290866b527 100644 --- a/BioArchLinux/r-shinymanager/PKGBUILD +++ b/BioArchLinux/r-shinymanager/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Authentication Management for 'Shiny' Applications" arch=(any) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-billboarder r-dbi diff --git a/BioArchLinux/r-shinymeta/PKGBUILD b/BioArchLinux/r-shinymeta/PKGBUILD index 6e499ec5f2..f7b7dffcce 100644 --- a/BioArchLinux/r-shinymeta/PKGBUILD +++ b/BioArchLinux/r-shinymeta/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Export Domain Logic from Shiny using Meta-Programming" arch=(any) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-callr r-fastmap diff --git a/BioArchLinux/r-sigspack/PKGBUILD b/BioArchLinux/r-sigspack/PKGBUILD index a627f42c62..6ad9743511 100644 --- a/BioArchLinux/r-sigspack/PKGBUILD +++ b/BioArchLinux/r-sigspack/PKGBUILD @@ -9,7 +9,7 @@ pkgrel=1 pkgdesc="Mutational Signature Estimation for Single Samples" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-biobase r-biostrings diff --git a/BioArchLinux/r-simpleseg/PKGBUILD b/BioArchLinux/r-simpleseg/PKGBUILD index 28291fd0da..f0af1e7275 100644 --- a/BioArchLinux/r-simpleseg/PKGBUILD +++ b/BioArchLinux/r-simpleseg/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=1 pkgdesc="A package to perform simple cell segmentation" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-biocparallel r-cytomapper diff --git a/BioArchLinux/r-speckle/PKGBUILD b/BioArchLinux/r-speckle/PKGBUILD index 699de69a64..aa2d24fa69 100644 --- a/BioArchLinux/r-speckle/PKGBUILD +++ b/BioArchLinux/r-speckle/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Statistical methods for analysing single cell RNA-seq data" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-edger r-ggplot2 diff --git a/BioArchLinux/r-spotclean/PKGBUILD b/BioArchLinux/r-spotclean/PKGBUILD index 3d533a7e7e..65d6043a42 100644 --- a/BioArchLinux/r-spotclean/PKGBUILD +++ b/BioArchLinux/r-spotclean/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="SpotClean adjusts for spot swapping in spatial transcriptomics data" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-dplyr r-ggplot2 diff --git a/BioArchLinux/r-ssanv/PKGBUILD b/BioArchLinux/r-ssanv/PKGBUILD index 69f95460ff..fe25c43a42 100644 --- a/BioArchLinux/r-ssanv/PKGBUILD +++ b/BioArchLinux/r-ssanv/PKGBUILD @@ -9,7 +9,7 @@ pkgrel=3 pkgdesc="Sample Size Adjusted for Nonadherence or Variability of Input Parameters" arch=(any) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r ) diff --git a/BioArchLinux/r-ssnappy/PKGBUILD b/BioArchLinux/r-ssnappy/PKGBUILD index 2170bce693..c5b04a45cb 100644 --- a/BioArchLinux/r-ssnappy/PKGBUILD +++ b/BioArchLinux/r-ssnappy/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Single Sample directioNAl Pathway Perturbation analYsis" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-dplyr r-edger diff --git a/BioArchLinux/r-statial/PKGBUILD b/BioArchLinux/r-statial/PKGBUILD index c29ad4c91d..d05438cdbe 100644 --- a/BioArchLinux/r-statial/PKGBUILD +++ b/BioArchLinux/r-statial/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="A package to identify changes in cell state relative to spatial associations" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-biocparallel r-concaveman diff --git a/BioArchLinux/r-stdeconvolve/PKGBUILD b/BioArchLinux/r-stdeconvolve/PKGBUILD index 8f4131e334..06139cea14 100644 --- a/BioArchLinux/r-stdeconvolve/PKGBUILD +++ b/BioArchLinux/r-stdeconvolve/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Reference-free Cell-Type Deconvolution of Multi-Cellular Spatially Resolved Transcriptomics Data" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-biocparallel r-clue diff --git a/BioArchLinux/r-strex/PKGBUILD b/BioArchLinux/r-strex/PKGBUILD index c3bc318f96..0f5143c767 100644 --- a/BioArchLinux/r-strex/PKGBUILD +++ b/BioArchLinux/r-strex/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Extra String Manipulation Functions" arch=(x86_64) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-checkmate r-magrittr diff --git a/BioArchLinux/r-stringdist/PKGBUILD b/BioArchLinux/r-stringdist/PKGBUILD index bd32d1a9a2..e4766e69d6 100644 --- a/BioArchLinux/r-stringdist/PKGBUILD +++ b/BioArchLinux/r-stringdist/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Approximate String Matching, Fuzzy Text Search, and String Distance Functions" arch=(x86_64) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r ) diff --git a/BioArchLinux/r-svmdo/PKGBUILD b/BioArchLinux/r-svmdo/PKGBUILD index 725083a354..72b227e15c 100644 --- a/BioArchLinux/r-svmdo/PKGBUILD +++ b/BioArchLinux/r-svmdo/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=1 pkgdesc="Identification of Tumor-Discriminating mRNA Signatures via Support Vector Machines Supported by Disease Ontology" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-annotationdbi r-bsda diff --git a/BioArchLinux/r-syntenet/PKGBUILD b/BioArchLinux/r-syntenet/PKGBUILD index 0b159d9bce..77dfaa58ee 100644 --- a/BioArchLinux/r-syntenet/PKGBUILD +++ b/BioArchLinux/r-syntenet/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=1 pkgdesc="Inference And Analysis Of Synteny Networks" arch=(x86_64) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-biocparallel r-biostrings diff --git a/BioArchLinux/r-tadar/PKGBUILD b/BioArchLinux/r-tadar/PKGBUILD index efefd4868a..f46fc5a9d3 100644 --- a/BioArchLinux/r-tadar/PKGBUILD +++ b/BioArchLinux/r-tadar/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Transcriptome Analysis of Differential Allelic Representation" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-biocgenerics r-genomeinfodb diff --git a/BioArchLinux/r-tca/PKGBUILD b/BioArchLinux/r-tca/PKGBUILD index 52561ae95d..39228ba7fe 100644 --- a/BioArchLinux/r-tca/PKGBUILD +++ b/BioArchLinux/r-tca/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Tensor Composition Analysis" arch=(any) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-config r-data.table diff --git a/BioArchLinux/r-tdbasedufe/PKGBUILD b/BioArchLinux/r-tdbasedufe/PKGBUILD index d3538eba84..ef8fc98633 100644 --- a/BioArchLinux/r-tdbasedufe/PKGBUILD +++ b/BioArchLinux/r-tdbasedufe/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Tensor Decomposition Based Unsupervised Feature Extraction" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-genomicranges r-mofadata diff --git a/BioArchLinux/r-tdbasedufeadv/PKGBUILD b/BioArchLinux/r-tdbasedufeadv/PKGBUILD index 672dca0d8b..325bf70a34 100644 --- a/BioArchLinux/r-tdbasedufeadv/PKGBUILD +++ b/BioArchLinux/r-tdbasedufeadv/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Advanced package of tensor decomposition based unsupervised feature extraction" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-biobase r-dose diff --git a/BioArchLinux/r-testit/PKGBUILD b/BioArchLinux/r-testit/PKGBUILD index 86a72cd097..e03acca9d4 100644 --- a/BioArchLinux/r-testit/PKGBUILD +++ b/BioArchLinux/r-testit/PKGBUILD @@ -11,7 +11,7 @@ pkgrel=3 pkgdesc="A Simple Package for Testing R Packages" arch=(any) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r ) diff --git a/BioArchLinux/r-tidyheatmap/PKGBUILD b/BioArchLinux/r-tidyheatmap/PKGBUILD index 1c30e38561..9619214073 100644 --- a/BioArchLinux/r-tidyheatmap/PKGBUILD +++ b/BioArchLinux/r-tidyheatmap/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="A Tidy Implementation of Heatmap" arch=(any) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-circlize r-complexheatmap diff --git a/BioArchLinux/r-tidyseurat/PKGBUILD b/BioArchLinux/r-tidyseurat/PKGBUILD index 05dcee99c4..eb0912fab2 100644 --- a/BioArchLinux/r-tidyseurat/PKGBUILD +++ b/BioArchLinux/r-tidyseurat/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=1 pkgdesc="Brings Seurat to the Tidyverse" arch=(any) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-cli r-dplyr diff --git a/BioArchLinux/r-timechange/PKGBUILD b/BioArchLinux/r-timechange/PKGBUILD index 2c58ddf1b3..35504e6186 100644 --- a/BioArchLinux/r-timechange/PKGBUILD +++ b/BioArchLinux/r-timechange/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=3 pkgdesc="Efficient Manipulation of Date-Times" arch=(x86_64) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( cctz r diff --git a/BioArchLinux/r-tinytest/PKGBUILD b/BioArchLinux/r-tinytest/PKGBUILD index 1dc9bade23..b1e3e4347c 100644 --- a/BioArchLinux/r-tinytest/PKGBUILD +++ b/BioArchLinux/r-tinytest/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Lightweight and Feature Complete Unit Testing Framework" arch=(any) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r ) diff --git a/BioArchLinux/r-top/PKGBUILD b/BioArchLinux/r-top/PKGBUILD index cd064ae3ed..c7f020e755 100644 --- a/BioArchLinux/r-top/PKGBUILD +++ b/BioArchLinux/r-top/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="TOP Constructs Transferable Model Across Gene Expression Platforms" arch=(any) url="https://bioconductor.org/packages/$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-assertthat r-caret diff --git a/BioArchLinux/r-tsibble/PKGBUILD b/BioArchLinux/r-tsibble/PKGBUILD index 79fd453e4f..3e59fb38dc 100644 --- a/BioArchLinux/r-tsibble/PKGBUILD +++ b/BioArchLinux/r-tsibble/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Tidy Temporal Data Frames and Tools" arch=(any) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-anytime r-dplyr diff --git a/BioArchLinux/r-ttservice/PKGBUILD b/BioArchLinux/r-ttservice/PKGBUILD index c892ba824e..71c01864cf 100644 --- a/BioArchLinux/r-ttservice/PKGBUILD +++ b/BioArchLinux/r-ttservice/PKGBUILD @@ -9,7 +9,7 @@ pkgrel=1 pkgdesc="A Service for Tidy Transcriptomics Software Suite" arch=(any) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r-dplyr r-plotly diff --git a/BioArchLinux/r-vgam/PKGBUILD b/BioArchLinux/r-vgam/PKGBUILD index 1cd5813bbd..c7f77a0347 100644 --- a/BioArchLinux/r-vgam/PKGBUILD +++ b/BioArchLinux/r-vgam/PKGBUILD @@ -8,7 +8,7 @@ pkgrel=2 pkgdesc="Vector Generalized Linear and Additive Models" arch=(x86_64) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r ) diff --git a/BioArchLinux/r-whisker/PKGBUILD b/BioArchLinux/r-whisker/PKGBUILD index 753b66e15a..14479baf6f 100644 --- a/BioArchLinux/r-whisker/PKGBUILD +++ b/BioArchLinux/r-whisker/PKGBUILD @@ -12,7 +12,7 @@ pkgrel=3 pkgdesc="{{mustache}} for R, Logicless Templating" arch=(any) url="https://cran.r-project.org/package=$_pkgname" -license=(GPL3) +license=('GPL-3.0-only') depends=( r ) diff --git a/lilac-extensions/lilac_r_utils.py b/lilac-extensions/lilac_r_utils.py index 8d4d97c9d6..4655186593 100644 --- a/lilac-extensions/lilac_r_utils.py +++ b/lilac-extensions/lilac_r_utils.py @@ -207,7 +207,7 @@ license_map = { "GPL (>=2)": "GPL-2.0-or-later", "GPL-2": "GPL2", "GPL-2 | GPL-3": "GPL-2.0-only OR GPL-3.0-only", - "GPL-3": "GPL3", + "GPL-3": "GPL-3.0-only", "LGPL": "LGPL-2.0-or-later", "LGPL (>= 2)": "LGPL", "LGPL (>= 2.1)": "LGPL",