r-pbkrtest: fix depends, use metadata checks

BioArchLinux/r-pbkrtest/PKGBUILD

@@ -3,33 +3,35 @@
 # Contributor: Taekyung Kim <Taekyung.Kim.Maths@gmail.com>
 
 _pkgname=pbkrtest
-_pkgver=0.5.2
+_pkgver=0.5.3
 pkgname=r-${_pkgname,,}
-pkgver=0.5.2
-pkgrel=5
-pkgdesc='Parametric Bootstrap, Kenward-Roger and Satterthwaite Based Methods for Test in Mixed Models'
-arch=('any')
-url="https://cran.r-project.org/package=${_pkgname}"
-license=('GPL')
+pkgver=${_pkgver//-/.}
+pkgrel=0
+pkgdesc="Parametric Bootstrap, Kenward-Roger and Satterthwaite Based Methods for Test in Mixed Models"
+arch=(any)
+url="https://cran.r-project.org/package=$_pkgname"
+license=('GPL-2.0-or-later')
 depends=(
-  r
   r-broom
+  r-doby
   r-dplyr
   r-lme4
   r-numderiv
 )
 optdepends=(
   r-knitr
+  r-markdown
 )
 source=("https://cran.r-project.org/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
-sha256sums=('8e79adf035a0fcf3c82145ad55847497379e009f7be880ba3007ebeb2e69b6e3')
+md5sums=('d4501121ded98c6ced803b89c7abe4d9')
+b2sums=('1d88cd24b7e28cb06de11b7d74d36cd46aa3b474c19ce1e960e18eaa5bbe304fa5f89e2df95971faef797f60ff571878dfbf546f088cd032577cb84e0a8c50d5')
 
 build() {
-  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+  mkdir build
+  R CMD INSTALL -l build "$_pkgname"
 }
 
 package() {
-  install -dm0755 "${pkgdir}/usr/lib/R/library"
-  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+  install -d "$pkgdir/usr/lib/R/library"
+  cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
 }
-# vim:set ts=2 sw=2 et:

BioArchLinux/r-pbkrtest/lilac.py

@@ -1,12 +1,13 @@
 #!/usr/bin/env python3
 from lilaclib import *
 
+import os
+import sys
+sys.path.append(os.path.normpath(f'{__file__}/../../../lilac-extensions'))
+from lilac_r_utils import r_pre_build
+
 def pre_build():
-    for line in edit_file('PKGBUILD'):
-        if line.startswith('_pkgver='):
-            line = f'_pkgver={_G.newver}'
-        print(line)
-    update_pkgver_and_pkgrel(_G.newver.replace(':', '.').replace('-', '.'))
+    r_pre_build(_G)
 
 def post_build():
     git_pkgbuild_commit()

BioArchLinux/r-pbkrtest/lilac.yaml

@@ -4,11 +4,13 @@ maintainers:
   email: kuoi@bioarchlinux.org
 repo_depends:
 - r-broom
+- r-doby
 - r-dplyr
 - r-lme4
 - r-numderiv
 update_on:
-- regex: pbkrtest_([\d._-]+).tar.gz
-  source: regex
-  url: https://cran.r-project.org/package=pbkrtest
+- source: rpkgs
+  pkgname: pbkrtest
+  repo: cran
+  md5: true
 - alias: r