mirror of
https://github.com/BioArchLinux/Packages.git
synced 2025-03-10 12:02:42 +00:00
r-*: use metadata checks for several packages
This commit is contained in:
Pekka Ristola
parent
3e9d145912
commit
c865380b86
18 changed files with 134 additions and 109 deletions
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@ -3,24 +3,25 @@
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_pkgname=distillery
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_pkgver=1.2-1
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pkgname=r-${_pkgname,,}
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pkgver=1.2.1
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pkgver=${_pkgver//-/.}
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pkgrel=6
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pkgdesc='Method Functions for Confidence Intervals and to Distill Information from an Object'
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arch=('any')
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url="https://cran.r-project.org/package=${_pkgname}"
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license=('GPL')
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pkgdesc="Method Functions for Confidence Intervals and to Distill Information from an Object"
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arch=(any)
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url="https://cran.r-project.org/package=$_pkgname"
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license=('GPL-2.0-or-later')
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depends=(
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r
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)
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source=("https://cran.r-project.org/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
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sha256sums=('4b88f0b34e472b9134ad403fb32283424f1883a5943e52c55f1fe05995efb5fa')
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md5sums=('239696bd8b41ce225a7b0a80656d5e21')
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b2sums=('ef6208855b76735404ca0592b1456ca0b9c128954b518dd5890e6bb946408856526458cfdd85fd8ab0fe0c4acf0e19dd0f62d3b1e416144a3230184a5caf9059')
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build() {
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R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
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mkdir build
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R CMD INSTALL -l build "$_pkgname"
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}
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package() {
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install -dm0755 "${pkgdir}/usr/lib/R/library"
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cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
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install -d "$pkgdir/usr/lib/R/library"
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cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
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}
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# vim:set ts=2 sw=2 et:
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@ -1,12 +1,13 @@
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#!/usr/bin/env python3
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from lilaclib import *
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import os
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import sys
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sys.path.append(os.path.normpath(f'{__file__}/../../../lilac-extensions'))
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from lilac_r_utils import r_pre_build
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def pre_build():
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for line in edit_file('PKGBUILD'):
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if line.startswith('_pkgver='):
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line = f'_pkgver={_G.newver}'
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print(line)
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update_pkgver_and_pkgrel(_G.newver.replace(':', '.').replace('-', '.'))
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r_pre_build(_G)
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def post_build():
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git_pkgbuild_commit()
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@ -3,7 +3,8 @@ maintainers:
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- github: starsareintherose
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email: kuoi@bioarchlinux.org
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update_on:
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- regex: distillery_([\d._-]+).tar.gz
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source: regex
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url: https://cran.r-project.org/package=distillery
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- source: rpkgs
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pkgname: distillery
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repo: cran
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md5: true
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- alias: r
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@ -3,24 +3,25 @@
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_pkgname=extrafontdb
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_pkgver=1.0
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pkgname=r-${_pkgname,,}
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pkgver=1.0
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pkgver=${_pkgver//-/.}
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pkgrel=8
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pkgdesc='Package for holding the database for the extrafont package'
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arch=('any')
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url="https://cran.r-project.org/package=${_pkgname}"
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license=('GPL')
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pkgdesc="Package for holding the database for the extrafont package"
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arch=(any)
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url="https://cran.r-project.org/package=$_pkgname"
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license=('GPL-2.0-only')
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depends=(
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r
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)
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source=("https://cran.r-project.org/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
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sha256sums=('faa1bafee5d4fbc24d03ed237f29f1179964ebac6e3a46ac25b0eceda020b684')
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md5sums=('69f3ce30cdd568e31369bdea7583943c')
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b2sums=('fb1d85422f36f4e2e5d1bee07951a1e77e91031664f9ac85e40f9a8318a9bd223baa5fd182da49f10d63863efb2c7f594e545b066ae55eb2645ad55c4da24734')
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build() {
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R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
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mkdir build
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R CMD INSTALL -l build "$_pkgname"
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}
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package() {
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install -dm0755 "${pkgdir}/usr/lib/R/library"
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cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
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install -d "$pkgdir/usr/lib/R/library"
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cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
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}
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# vim:set ts=2 sw=2 et:
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@ -1,12 +1,16 @@
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#!/usr/bin/env python3
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from lilaclib import *
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import os
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import sys
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sys.path.append(os.path.normpath(f'{__file__}/../../../lilac-extensions'))
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from lilac_r_utils import r_pre_build
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def pre_build():
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for line in edit_file('PKGBUILD'):
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if line.startswith('_pkgver='):
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line = f'_pkgver={_G.newver}'
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print(line)
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update_pkgver_and_pkgrel(_G.newver.replace(':', '.').replace('-', '.'))
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r_pre_build(
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_G,
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expect_needscompilation = "",
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)
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def post_build():
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git_pkgbuild_commit()
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@ -3,7 +3,8 @@ maintainers:
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- github: starsareintherose
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email: kuoi@bioarchlinux.org
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update_on:
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- regex: extrafontdb_([\d._-]+).tar.gz
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source: regex
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url: https://cran.r-project.org/package=extrafontdb
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- source: rpkgs
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pkgname: extrafontdb
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repo: cran
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md5: true
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- alias: r
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@ -3,24 +3,26 @@
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_pkgname=GenSA
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_pkgver=1.1.14
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pkgname=r-${_pkgname,,}
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pkgver=1.1.14
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pkgver=${_pkgver//-/.}
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pkgrel=1
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pkgdesc='Generalized Simulated Annealing'
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arch=('x86_64')
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url="https://cran.r-project.org/package=${_pkgname}"
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license=('GPL')
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pkgdesc="R Functions for Generalized Simulated Annealing"
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arch=(x86_64)
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url="https://cran.r-project.org/package=$_pkgname"
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license=('GPL-2.0-only')
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depends=(
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blas
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r
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)
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source=("https://cran.r-project.org/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
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sha256sums=('66e455bb0e66d3c04af84d9dddc9b89f40b4cf9fe9ad1cf0714bcf30aa1b6837')
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md5sums=('9fa83600929fd3bf4a42a8501c32d478')
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b2sums=('70092c36dcb1943ed54e53d0c345989af30684ad6f6d2f00243fb809220488879a13d863e3f6c371710eeaef49fd13c595599c0733061544577d09d5c301616b')
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build() {
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R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
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mkdir build
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R CMD INSTALL -l build "$_pkgname"
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}
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package() {
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install -dm0755 "${pkgdir}/usr/lib/R/library"
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cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
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install -d "$pkgdir/usr/lib/R/library"
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cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
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}
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# vim:set ts=2 sw=2 et:
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@ -1,12 +1,13 @@
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#!/usr/bin/env python3
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from lilaclib import *
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import os
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import sys
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sys.path.append(os.path.normpath(f'{__file__}/../../../lilac-extensions'))
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from lilac_r_utils import r_pre_build
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def pre_build():
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for line in edit_file('PKGBUILD'):
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if line.startswith('_pkgver='):
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line = f'_pkgver={_G.newver}'
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print(line)
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update_pkgver_and_pkgrel(_G.newver.replace(':', '.').replace('-', '.'))
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r_pre_build(_G)
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def post_build():
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git_pkgbuild_commit()
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@ -3,7 +3,12 @@ maintainers:
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- github: starsareintherose
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email: kuoi@bioarchlinux.org
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update_on:
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- regex: GenSA_([\d._-]+).tar.gz
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source: regex
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url: https://cran.r-project.org/package=GenSA
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- source: rpkgs
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pkgname: GenSA
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repo: cran
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md5: true
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- alias: r
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- source: alpmfiles
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pkgname: blas
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filename: usr/lib/libblas\.so\.([^.]+)
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repo: extra
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@ -3,12 +3,12 @@
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_pkgname=HGNChelper
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_pkgver=0.8.1
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pkgname=r-${_pkgname,,}
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pkgver=0.8.1
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pkgver=${_pkgver//-/.}
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pkgrel=6
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pkgdesc='Identify and Correct Invalid HGNC Human Gene Symbols and MGI Mouse Gene Symbols'
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arch=('any')
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url="https://cran.r-project.org/package=${_pkgname}"
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license=('GPL')
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pkgdesc="Identify and Correct Invalid HGNC Human Gene Symbols and MGI Mouse Gene Symbols"
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arch=(any)
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url="https://cran.r-project.org/package=$_pkgname"
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license=('GPL-2.0-or-later')
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depends=(
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r
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)
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@ -18,14 +18,15 @@ optdepends=(
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r-testthat
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)
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source=("https://cran.r-project.org/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
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sha256sums=('aa3f0b3a8691ed93d63bec8f36d2954c6fcfd0b8b3efc705379248544c999363')
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md5sums=('45d4542ac3250350b96c3c9506acffcc')
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b2sums=('d32cefe15711f65345af36f085455d590a696f676f786f02b5c10caae101be3803f8d4852a7bca5a67cc6fdc81d6be0f4bf18b7d69ab7dcb68efdd9095d25dde')
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build() {
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R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
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mkdir build
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R CMD INSTALL -l build "$_pkgname"
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}
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package() {
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install -dm0755 "${pkgdir}/usr/lib/R/library"
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cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
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install -d "$pkgdir/usr/lib/R/library"
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cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
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}
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# vim:set ts=2 sw=2 et:
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@ -1,12 +1,13 @@
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#!/usr/bin/env python3
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from lilaclib import *
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import os
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import sys
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sys.path.append(os.path.normpath(f'{__file__}/../../../lilac-extensions'))
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from lilac_r_utils import r_pre_build
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def pre_build():
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for line in edit_file('PKGBUILD'):
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if line.startswith('_pkgver='):
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line = f'_pkgver={_G.newver}'
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print(line)
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update_pkgver_and_pkgrel(_G.newver.replace(':', '.').replace('-', '.'))
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r_pre_build(_G)
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def post_build():
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git_pkgbuild_commit()
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@ -3,7 +3,8 @@ maintainers:
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- github: starsareintherose
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email: kuoi@bioarchlinux.org
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update_on:
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- regex: HGNChelper_([\d._-]+).tar.gz
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source: regex
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url: https://cran.r-project.org/package=HGNChelper
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- source: rpkgs
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pkgname: HGNChelper
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repo: cran
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md5: true
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- alias: r
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@ -4,29 +4,29 @@
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_pkgname=multcompView
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_pkgver=0.1-9
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pkgname=r-${_pkgname,,}
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pkgver=0.1.9
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pkgver=${_pkgver//-/.}
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pkgrel=2
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pkgdesc='Visualizations of Paired Comparisons'
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arch=('any')
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url="https://cran.r-project.org/package=${_pkgname}"
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license=('GPL')
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pkgdesc="Visualizations of Paired Comparisons"
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arch=(any)
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url="https://cran.r-project.org/package=$_pkgname"
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license=('GPL-2.0-or-later')
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depends=(
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r
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)
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optdepends=(
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r-mass
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r-multcomp
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r-pgirmess
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)
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source=("https://cran.r-project.org/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
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sha256sums=('1f3993e9d51f3c7a711a881b6a20081a85ffab60c27828ceb3640a6b4c887397')
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md5sums=('78c19f8277cd060fc31628b3ac8188be')
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b2sums=('7e780ba698a987d9be08916f7a806037cf1a61836144d0fcbdc1aae56e3a9df2cab437e23cde3165449d410299e9829891a209c3aa5360c902c85bfabbb10c82')
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build() {
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R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
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mkdir build
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R CMD INSTALL -l build "$_pkgname"
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}
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package() {
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install -dm0755 "${pkgdir}/usr/lib/R/library"
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cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
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install -d "$pkgdir/usr/lib/R/library"
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cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
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}
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# vim:set ts=2 sw=2 et:
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|
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@ -1,12 +1,13 @@
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#!/usr/bin/env python3
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from lilaclib import *
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|
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import os
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import sys
|
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sys.path.append(os.path.normpath(f'{__file__}/../../../lilac-extensions'))
|
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from lilac_r_utils import r_pre_build
|
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|
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def pre_build():
|
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for line in edit_file('PKGBUILD'):
|
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if line.startswith('_pkgver='):
|
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line = f'_pkgver={_G.newver}'
|
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print(line)
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update_pkgver_and_pkgrel(_G.newver.replace(':', '.').replace('-', '.'))
|
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r_pre_build(_G)
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|
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def post_build():
|
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git_pkgbuild_commit()
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|
|
|
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|
|
@ -3,7 +3,8 @@ maintainers:
|
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- github: starsareintherose
|
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email: kuoi@bioarchlinux.org
|
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update_on:
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- regex: multcompView_([\d._-]+).tar.gz
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source: regex
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url: https://cran.r-project.org/package=multcompView
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- source: rpkgs
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pkgname: multcompView
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repo: cran
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md5: true
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- alias: r
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|
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|
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|
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@ -4,12 +4,12 @@
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_pkgname=rootSolve
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_pkgver=1.8.2.4
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pkgname=r-${_pkgname,,}
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pkgver=1.8.2.4
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pkgver=${_pkgver//-/.}
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pkgrel=1
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pkgdesc='Nonlinear Root Finding, Equilibrium and Steady-State Analysis of Ordinary Differential Equations'
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arch=('x86_64')
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url="https://cran.r-project.org/package=${_pkgname}"
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license=('GPL')
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pkgdesc="Nonlinear Root Finding, Equilibrium and Steady-State Analysis of Ordinary Differential Equations"
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arch=(x86_64)
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url="https://cran.r-project.org/package=$_pkgname"
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license=('GPL-2.0-or-later')
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depends=(
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r
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)
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@ -17,14 +17,15 @@ makedepends=(
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gcc-fortran
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)
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source=("https://cran.r-project.org/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
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sha256sums=('e16a317ea494192e0a5668a18f7eb99675f8edf3b3095861d213bc2590ad385d')
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md5sums=('55edadf34bf9065e60c7570e82bc4b16')
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b2sums=('bc47ed8a8d26c26ed7394a5d02d5209e79924e870d854c796aa9baa66b178c6ed0bf19d9636ebbd1aa5563ba3b1ec53c5ab5eede1d225461829a838d62299ac1')
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|
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build() {
|
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R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
|
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mkdir build
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R CMD INSTALL -l build "$_pkgname"
|
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}
|
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|
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package() {
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install -dm0755 "${pkgdir}/usr/lib/R/library"
|
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cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
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install -d "$pkgdir/usr/lib/R/library"
|
||||
cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
|
||||
}
|
||||
# vim:set ts=2 sw=2 et:
|
||||
|
|
|
|||
|
|
@ -1,12 +1,13 @@
|
|||
#!/usr/bin/env python3
|
||||
from lilaclib import *
|
||||
|
||||
import os
|
||||
import sys
|
||||
sys.path.append(os.path.normpath(f'{__file__}/../../../lilac-extensions'))
|
||||
from lilac_r_utils import r_pre_build
|
||||
|
||||
def pre_build():
|
||||
for line in edit_file('PKGBUILD'):
|
||||
if line.startswith('_pkgver='):
|
||||
line = f'_pkgver={_G.newver}'
|
||||
print(line)
|
||||
update_pkgver_and_pkgrel(_G.newver.replace(':', '.').replace('-', '.'))
|
||||
r_pre_build(_G)
|
||||
|
||||
def post_build():
|
||||
git_pkgbuild_commit()
|
||||
|
|
|
|||
|
|
@ -3,7 +3,8 @@ maintainers:
|
|||
- github: starsareintherose
|
||||
email: kuoi@bioarchlinux.org
|
||||
update_on:
|
||||
- regex: rootSolve_([\d._-]+).tar.gz
|
||||
source: regex
|
||||
url: https://cran.r-project.org/package=rootSolve
|
||||
- source: rpkgs
|
||||
pkgname: rootSolve
|
||||
repo: cran
|
||||
md5: true
|
||||
- alias: r
|
||||
|
|
|
|||
Loading…
Add table
Reference in a new issue