diff --git a/BioArchLinux/r-spicyr/PKGBUILD b/BioArchLinux/r-spicyr/PKGBUILD index 1263f5a316..d0f5c32a8c 100644 --- a/BioArchLinux/r-spicyr/PKGBUILD +++ b/BioArchLinux/r-spicyr/PKGBUILD @@ -2,10 +2,10 @@ # Contributor: Guoyi Zhang _pkgname=spicyR -_pkgver=1.12.2 +_pkgver=1.14.1 pkgname=r-${_pkgname,,} pkgver=${_pkgver//-/.} -pkgrel=1 +pkgrel=0 pkgdesc="Spatial analysis of in situ cytometry data" arch=(any) url="https://bioconductor.org/packages/${_pkgname}" @@ -20,7 +20,6 @@ depends=( r-ggforce r-ggplot2 r-iranges - r-lme4 r-lmertest r-pheatmap r-rlang @@ -31,17 +30,19 @@ depends=( r-spatstat.explore r-spatstat.geom r-summarizedexperiment + r-tibble r-tidyr ) optdepends=( r-biocstyle + r-imcrtools r-knitr r-pkgdown r-rmarkdown ) source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") -md5sums=('7a6b3fc3fa37d51eb2ab9cdfd2b2574e') -sha256sums=('1bb08b7fed1a1b21bef6cc8a1e2789f3a54f37d8da254f719ac3c812e87da813') +md5sums=('8c617b8b3508a351410a7c8661e560a4') +sha256sums=('80eb21bc2327af60983e7c480ddf4610ff90da5b13839f3cb75875f600061980') build() { mkdir -p build diff --git a/BioArchLinux/r-spicyr/lilac.yaml b/BioArchLinux/r-spicyr/lilac.yaml index 35f1d4b688..fde0c53db6 100644 --- a/BioArchLinux/r-spicyr/lilac.yaml +++ b/BioArchLinux/r-spicyr/lilac.yaml @@ -12,7 +12,6 @@ repo_depends: - r-ggforce - r-ggplot2 - r-iranges -- r-lme4 - r-lmertest - r-pheatmap - r-rlang @@ -23,6 +22,7 @@ repo_depends: - r-spatstat.explore - r-spatstat.geom - r-summarizedexperiment +- r-tibble - r-tidyr update_on: - source: rpkgs