diff --git a/fail/r-lpsymphony/PKGBUILD b/BioArchLinux/r-lpsymphony/PKGBUILD similarity index 63% rename from fail/r-lpsymphony/PKGBUILD rename to BioArchLinux/r-lpsymphony/PKGBUILD index 4a59d73e5e..3bc039fdf7 100644 --- a/fail/r-lpsymphony/PKGBUILD +++ b/BioArchLinux/r-lpsymphony/PKGBUILD @@ -12,7 +12,11 @@ url="https://bioconductor.org/packages/${_pkgname}" license=('EPL') depends=( r + coin-or-asl + coin-or-clp coin-or-coinutils + coin-or-osi + coin-or-cgl make glpk ) @@ -23,10 +27,16 @@ optdepends=( r-testthat ) source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") -sha256sums=('a') +sha256sums=('da49e8f36d5a479ead3a1e43e5a7c5676849b9b196f00ea4d95fb1e7c24262af') + +prepare() { + sed -i 's#CXXFLAGS="-w -g -O2"#CXXFLAGS="-w -g -O2 -I/usr/include/coin"#' "${srcdir}/${_pkgname}/configure" + tar cfz "${_pkgname}.tar.gz" "${_pkgname}" +} build() { - R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" + #R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" + R CMD INSTALL ${_pkgname}.tar.gz -l "${srcdir}" } package() { diff --git a/fail/r-lpsymphony/lilac.py b/BioArchLinux/r-lpsymphony/lilac.py similarity index 100% rename from fail/r-lpsymphony/lilac.py rename to BioArchLinux/r-lpsymphony/lilac.py diff --git a/fail/r-lpsymphony/lilac.yaml b/BioArchLinux/r-lpsymphony/lilac.yaml similarity index 100% rename from fail/r-lpsymphony/lilac.yaml rename to BioArchLinux/r-lpsymphony/lilac.yaml