mirror of
https://github.com/BioArchLinux/Packages.git
synced 2025-03-10 12:02:42 +00:00
r-*: use metadata checks for several packages
This commit is contained in:
Pekka Ristola
parent
2d855d1cf3
commit
d8bf5f6d19
15 changed files with 109 additions and 89 deletions
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@ -3,24 +3,28 @@
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_pkgname=GFA
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_pkgver=1.0.5
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pkgname=r-${_pkgname,,}
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pkgver=1.0.5
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pkgver=${_pkgver//-/.}
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pkgrel=1
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pkgdesc='Group Factor Analysis'
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arch=('any')
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url="https://cran.r-project.org/package=${_pkgname}"
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pkgdesc="Group Factor Analysis"
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arch=(any)
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url="https://cran.r-project.org/package=$_pkgname"
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license=('MIT')
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depends=(
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r
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)
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source=("https://cran.r-project.org/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
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sha256sums=('4d75b1effb0e31821b07386a900cf68e304c9925c3f2226c45ad2cae4450b7d1')
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md5sums=('120596244929ae4a15d1266567bc2b75')
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b2sums=('e51a23c416022af743db7bbbb39a06638dfede53a1bd9058d3875eb1b4d0e04a52a8fadf334d9a197a9ea0a684d47e547b2b7e30d1701e50ad5dc3611aaed064')
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build() {
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R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
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mkdir build
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R CMD INSTALL -l build "$_pkgname"
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}
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package() {
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install -dm0755 "${pkgdir}/usr/lib/R/library"
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cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
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install -d "$pkgdir/usr/lib/R/library"
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cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
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install -d "$pkgdir/usr/share/licenses/$pkgname"
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ln -s "/usr/lib/R/library/$_pkgname/LICENSE" "$pkgdir/usr/share/licenses/$pkgname"
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}
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# vim:set ts=2 sw=2 et:
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@ -1,12 +1,13 @@
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#!/usr/bin/env python3
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from lilaclib import *
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import os
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import sys
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sys.path.append(os.path.normpath(f'{__file__}/../../../lilac-extensions'))
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from lilac_r_utils import r_pre_build
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def pre_build():
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for line in edit_file('PKGBUILD'):
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if line.startswith('_pkgver='):
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line = f'_pkgver={_G.newver}'
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print(line)
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update_pkgver_and_pkgrel(_G.newver.replace(':', '.').replace('-', '.'))
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r_pre_build(_G)
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def post_build():
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git_pkgbuild_commit()
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@ -3,7 +3,8 @@ maintainers:
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- github: starsareintherose
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email: kuoi@bioarchlinux.org
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update_on:
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- regex: GFA_([\d._-]+).tar.gz
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source: regex
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url: https://cran.r-project.org/package=GFA
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- source: rpkgs
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pkgname: GFA
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repo: cran
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md5: true
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- alias: r
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@ -3,24 +3,25 @@
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_pkgname=PMA
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_pkgver=1.2-3
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pkgname=r-${_pkgname,,}
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pkgver=1.2.3
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pkgver=${_pkgver//-/.}
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pkgrel=1
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pkgdesc='Penalized Multivariate Analysis'
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arch=('x86_64')
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url="https://cran.r-project.org/package=${_pkgname}"
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license=('GPL')
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pkgdesc="Penalized Multivariate Analysis"
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arch=(x86_64)
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url="https://cran.r-project.org/package=$_pkgname"
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license=('GPL-2.0-or-later')
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depends=(
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r
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)
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source=("https://cran.r-project.org/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
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sha256sums=('e7572f82c159f34058fdec4c8158d394d6cf68b7978953c8893315e298cc6d06')
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md5sums=('f4761339585ee1f7a86562b6863cd985')
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b2sums=('689f0a63a3d33599ce54f7f8db557f14e78fddfe6a613ca333a02cde48a401356800a7372873ef8bc0b64bf2f29ccd0f08f43e4a442e50189c5ef33479306a13')
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build() {
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R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
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mkdir build
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R CMD INSTALL -l build "$_pkgname"
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}
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package() {
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install -dm0755 "${pkgdir}/usr/lib/R/library"
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cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
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install -d "$pkgdir/usr/lib/R/library"
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cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
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}
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# vim:set ts=2 sw=2 et:
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@ -1,12 +1,13 @@
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#!/usr/bin/env python3
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from lilaclib import *
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import os
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import sys
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sys.path.append(os.path.normpath(f'{__file__}/../../../lilac-extensions'))
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from lilac_r_utils import r_pre_build
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def pre_build():
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for line in edit_file('PKGBUILD'):
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if line.startswith('_pkgver='):
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line = f'_pkgver={_G.newver}'
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print(line)
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update_pkgver_and_pkgrel(_G.newver.replace(':', '.').replace('-', '.'))
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r_pre_build(_G)
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def post_build():
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git_pkgbuild_commit()
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@ -3,7 +3,8 @@ maintainers:
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- github: starsareintherose
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email: kuoi@bioarchlinux.org
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update_on:
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- regex: PMA_([\d._-]+).tar.gz
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source: regex
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url: https://cran.r-project.org/package=PMA
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- source: rpkgs
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pkgname: PMA
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repo: cran
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md5: true
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- alias: r
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@ -3,24 +3,25 @@
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_pkgname=segmented
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_pkgver=2.0-3
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pkgname=r-${_pkgname,,}
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pkgver=2.0.3
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pkgver=${_pkgver//-/.}
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pkgrel=1
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pkgdesc='Regression Models with Break-Points / Change-Points Estimation'
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arch=('any')
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url="https://cran.r-project.org/package=${_pkgname}"
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license=('GPL')
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pkgdesc="Regression Models with Break-Points / Change-Points Estimation (with Possibly Random Effects)"
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arch=(any)
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url="https://cran.r-project.org/package=$_pkgname"
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license=('GPL-2.0-or-later')
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depends=(
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r
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)
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source=("https://cran.r-project.org/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
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sha256sums=('e7a88ae270ecb853067fbe26e21477dd369b47cefc443c3af486f2bebed909b9')
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md5sums=('1ea139e06c62456571430a62cc3cbc8b')
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b2sums=('96d706f1df10c0b9ffba604bc1e8d684ebaaf153224f754fad90379b8f240b3d4e78580ea5c761faf989a244e6f7c632619ac6862d64590964e925570dbd78c2')
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build() {
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R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
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mkdir build
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R CMD INSTALL -l build "$_pkgname"
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}
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package() {
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install -dm0755 "${pkgdir}/usr/lib/R/library"
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cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
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install -d "$pkgdir/usr/lib/R/library"
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cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
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}
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# vim:set ts=2 sw=2 et:
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@ -1,12 +1,13 @@
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#!/usr/bin/env python3
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from lilaclib import *
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import os
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import sys
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sys.path.append(os.path.normpath(f'{__file__}/../../../lilac-extensions'))
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from lilac_r_utils import r_pre_build
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def pre_build():
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for line in edit_file('PKGBUILD'):
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if line.startswith('_pkgver='):
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line = f'_pkgver={_G.newver}'
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print(line)
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update_pkgver_and_pkgrel(_G.newver.replace(':', '.').replace('-', '.'))
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r_pre_build(_G)
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def post_build():
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git_pkgbuild_commit()
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@ -3,7 +3,8 @@ maintainers:
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- github: starsareintherose
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email: kuoi@bioarchlinux.org
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update_on:
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- regex: segmented_([\d._-]+).tar.gz
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source: regex
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url: https://cran.r-project.org/package=segmented
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- source: rpkgs
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pkgname: segmented
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repo: cran
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md5: true
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- alias: r
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@ -4,12 +4,12 @@
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_pkgname=tmvnsim
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_pkgver=1.0-2
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pkgname=r-${_pkgname,,}
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pkgver=1.0.2
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pkgver=${_pkgver//-/.}
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pkgrel=10
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pkgdesc='Truncated Multivariate Normal Simulation'
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arch=('x86_64')
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url="https://cran.r-project.org/package=${_pkgname}"
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license=('GPL')
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pkgdesc="Truncated Multivariate Normal Simulation"
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arch=(x86_64)
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url="https://cran.r-project.org/package=$_pkgname"
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license=('GPL-2.0-only')
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depends=(
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r
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)
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@ -17,14 +17,15 @@ makedepends=(
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gcc-fortran
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)
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source=("https://cran.r-project.org/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
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sha256sums=('97f63d0bab3b240cc7bdbe6e6e74e90ad25a4382a345ee51a26fe3959edeba0f')
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md5sums=('50a38f2142ee328060aca7d2672b5dcf')
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b2sums=('09105660070368676a161201c1e0a8b12ab265353ef51f4fcb4e223b0fa7a3261d531dc8a629620f0c9d17ade5e5689d7e50bdb8a8266ccb8166f54e98408286')
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build() {
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R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
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mkdir build
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R CMD INSTALL -l build "$_pkgname"
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}
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package() {
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install -dm0755 "${pkgdir}/usr/lib/R/library"
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cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
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install -d "$pkgdir/usr/lib/R/library"
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cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
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}
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# vim:set ts=2 sw=2 et:
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@ -1,12 +1,13 @@
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#!/usr/bin/env python3
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from lilaclib import *
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import os
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import sys
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sys.path.append(os.path.normpath(f'{__file__}/../../../lilac-extensions'))
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from lilac_r_utils import r_pre_build
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def pre_build():
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for line in edit_file('PKGBUILD'):
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if line.startswith('_pkgver='):
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line = f'_pkgver={_G.newver}'
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print(line)
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update_pkgver_and_pkgrel(_G.newver.replace(':', '.').replace('-', '.'))
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r_pre_build(_G)
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def post_build():
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git_pkgbuild_commit()
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@ -3,7 +3,8 @@ maintainers:
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- github: starsareintherose
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email: kuoi@bioarchlinux.org
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update_on:
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- regex: tmvnsim_([\d._-]+).tar.gz
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source: regex
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url: https://cran.r-project.org/package=tmvnsim
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- source: rpkgs
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pkgname: tmvnsim
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repo: cran
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md5: true
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- alias: r
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@ -3,11 +3,11 @@
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_pkgname=wesanderson
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_pkgver=0.3.7
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pkgname=r-${_pkgname,,}
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pkgver=0.3.7
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pkgver=${_pkgver//-/.}
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pkgrel=1
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pkgdesc='A Wes Anderson Palette Generator'
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arch=('any')
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url="https://cran.r-project.org/package=${_pkgname}"
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pkgdesc="A Wes Anderson Palette Generator"
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arch=(any)
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url="https://cran.r-project.org/package=$_pkgname"
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license=('MIT')
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depends=(
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r
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@ -16,15 +16,18 @@ optdepends=(
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r-ggplot2
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)
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source=("https://cran.r-project.org/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
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sha256sums=('c92e5604e1e149e00f49fd236c6ab8cd09d96106eb14479f7839e6996bf95e4e')
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md5sums=('8becbb8ab06d2c694c06d0a1b10da95b')
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b2sums=('7fb2db1777ccf60ded0fa4e11079705c5c98a566a51ec88c911e5c64573c3a679102e8aa38e967decefe554b0504ea37628e89a391095ee8707e6d9296d49b54')
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build() {
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R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
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mkdir build
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R CMD INSTALL -l build "$_pkgname"
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}
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package() {
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install -dm0755 "${pkgdir}/usr/lib/R/library"
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cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
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install -Dm644 "${_pkgname}/LICENSE" -t "${pkgdir}/usr/share/licenses/${pkgname}"
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install -d "$pkgdir/usr/lib/R/library"
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cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
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install -d "$pkgdir/usr/share/licenses/$pkgname"
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ln -s "/usr/lib/R/library/$_pkgname/LICENSE" "$pkgdir/usr/share/licenses/$pkgname"
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}
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# vim:set ts=2 sw=2 et:
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@ -1,12 +1,13 @@
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#!/usr/bin/env python3
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from lilaclib import *
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import os
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import sys
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sys.path.append(os.path.normpath(f'{__file__}/../../../lilac-extensions'))
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from lilac_r_utils import r_pre_build
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def pre_build():
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for line in edit_file('PKGBUILD'):
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if line.startswith('_pkgver='):
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line = f'_pkgver={_G.newver}'
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print(line)
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update_pkgver_and_pkgrel(_G.newver.replace(':', '.').replace('-', '.'))
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r_pre_build(_G)
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def post_build():
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git_pkgbuild_commit()
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@ -3,7 +3,8 @@ maintainers:
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- github: starsareintherose
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email: kuoi@bioarchlinux.org
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update_on:
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- regex: wesanderson_([\d._-]+).tar.gz
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source: regex
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url: https://cran.r-project.org/package=wesanderson
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- source: rpkgs
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pkgname: wesanderson
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repo: cran
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md5: true
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- alias: r
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|||
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