diff --git a/BioArchLinux/r-zlibbioc/PKGBUILD b/BioArchLinux/r-zlibbioc/PKGBUILD index d6ed163d20..aaff1df14d 100644 --- a/BioArchLinux/r-zlibbioc/PKGBUILD +++ b/BioArchLinux/r-zlibbioc/PKGBUILD @@ -1,14 +1,18 @@ -# Maintainer: Guoyi Zhang +# Maintainer: Pekka Ristola +# Contributor: Guoyi Zhang +# Contributor: peippo +# Contributor: Viktor Drobot (aka dviktor) linux776 [at] gmail [dot] com +# Contributor: Grey Christoforo _pkgname=zlibbioc _pkgver=1.46.0 pkgname=r-${_pkgname,,} -pkgver=1.46.0 +pkgver=${_pkgver//-/.} pkgrel=3 -pkgdesc='An R packaged zlib-1.2.5' -arch=('x86_64') +pkgdesc="An R packaged zlib-1.2.5" +arch=(x86_64) url="https://bioconductor.org/packages/${_pkgname}" -license=('Artistic2.0') +license=(Artistic2.0) depends=( r ) @@ -16,14 +20,15 @@ optdepends=( r-biocstyle ) source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +md5sums=('1036b343d28d7fe87cd23543d6702425') sha256sums=('a3d4ea1e49a4bc1220165d3a3940e67c93145835b3b7c3a674164f06e32c6d74') build() { - R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" + mkdir -p build + R CMD INSTALL "$_pkgname" -l build } package() { - install -dm0755 "${pkgdir}/usr/lib/R/library" - cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" + install -d "$pkgdir/usr/lib/R/library" + cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library" } -# vim:set ts=2 sw=2 et: diff --git a/BioArchLinux/r-zlibbioc/lilac.py b/BioArchLinux/r-zlibbioc/lilac.py index 620556bc87..cef0b751b2 100644 --- a/BioArchLinux/r-zlibbioc/lilac.py +++ b/BioArchLinux/r-zlibbioc/lilac.py @@ -1,12 +1,16 @@ #!/usr/bin/env python3 from lilaclib import * +import os +import sys +sys.path.append(os.path.normpath(f'{__file__}/../../../lilac-extensions')) +from lilac_r_utils import r_pre_build + def pre_build(): - for line in edit_file('PKGBUILD'): - if line.startswith('_pkgver='): - line = f'_pkgver={_G.newver}' - print(line) - update_pkgver_and_pkgrel(_G.newver.replace(':', '.').replace('-', '.')) + r_pre_build( + _G, + expect_license = "Artistic-2.0 + file LICENSE", + ) def post_build(): git_pkgbuild_commit() diff --git a/BioArchLinux/r-zlibbioc/lilac.yaml b/BioArchLinux/r-zlibbioc/lilac.yaml index 8660401b6f..39ddef022a 100644 --- a/BioArchLinux/r-zlibbioc/lilac.yaml +++ b/BioArchLinux/r-zlibbioc/lilac.yaml @@ -1,9 +1,10 @@ build_prefix: extra-x86_64 maintainers: -- github: starsareintherose - email: kuoi@bioarchlinux.org +- github: pekkarr + email: pekkarr@protonmail.com update_on: -- regex: zlibbioc_([\d._-]+).tar.gz - source: regex - url: https://bioconductor.org/packages/zlibbioc +- source: rpkgs + pkgname: zlibbioc + repo: bioc + md5: true - alias: r