BioArchLinux/Packages
2
0
Fork 0
mirror of https://github.com/BioArchLinux/Packages.git synced 2025-03-10 12:02:42 +00:00
Code Issues Projects Releases Packages Wiki Activity

augustus: use /usr/lib instead of /usr/share

Browse source
This commit is contained in:
sukanka 2022-11-22 09:38:04 +08:00
parent a57650f9cd
commit efa48c552d
1 changed files with 4 additions and 4 deletions
Show stats Download patch file Download diff file Expand all files Collapse all files

8
BioArchLinux/augustus/PKGBUILD
View file

@ -3,7 +3,7 @@
pkgname=augustus
_pkgname=Augustus
pkgver=3.5.0
pkgrel=1
pkgrel=2
pkgdesc="A eukaryotic gene prediction program"
arch=('i686' 'x86_64')
url="http://augustus.gobics.de/"
@ -20,18 +20,18 @@ prepare() {
build() {
cd $_pkgname-$pkgver
make SAMTOOLS=/usr/include/bam PREFIX="$pkgdir"/usr INSTALLDIR=${pkgdir}/opt/augustus
make SAMTOOLS=/usr/include/bam PREFIX="$pkgdir"/usr INSTALLDIR=${pkgdir}/usr/lib/augustus
}
package() {
cd $_pkgname-$pkgver
install -d ${pkgdir}/usr/bin
make DESTDIR="$pkgdir" PREFIX="$pkgdir"/usr INSTALLDIR=${pkgdir}/usr/share/augustus install
make DESTDIR="$pkgdir" PREFIX="$pkgdir"/usr INSTALLDIR=${pkgdir}/usr/lib/augustus install
# fix broken links
for bin in {augustus,etraining,prepareAlign,fastBlockSearch}
do
ln -sf /usr/share/augustus/bin/${bin} "$pkgdir"/usr/bin/${bin}
ln -sf /usr/lib/augustus/bin/${bin} "$pkgdir"/usr/bin/${bin}
done
rm "$pkgdir"/usr/bin/{load2db,getSeq}