add bioconductor to prepare stage

prepare/r-a4/PKGBUILD

@@ -0,0 +1,39 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=a4
+_pkgver=1.42.0
+pkgname=r-${_pkgname,,}
+pkgver=${_pkgver//[:-]/.}
+pkgrel=1
+pkgdesc='Automated Affymetrix Array Analysis Umbrella Package'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('GPL')
+depends=(
+  r
+  r-a4base
+  r-a4classif
+  r-a4core
+  r-a4preproc
+  r-a4reporting
+)
+optdepends=(
+  r-all
+  r-cairo
+  r-gostats
+  r-mlp
+  r-nlcv
+  r-rgraphviz
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('a')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et:

prepare/r-a4/lilac.py

@@ -0,0 +1,12 @@
+#!/usr/bin/env python3
+from lilaclib import *
+
+def pre_build():
+    for line in edit_file('PKGBUILD'):
+        if line.startswith('_pkgver='):
+            line = f'_pkgver={_G.newver}'
+        print(line)
+    update_pkgver_and_pkgrel(_G.newver.replace(':', '.').replace('-', '.'))
+
+def post_build():
+    git_pkgbuild_commit()

prepare/r-a4/lilac.yaml

@@ -0,0 +1,14 @@
+build_prefix: extra-x86_64
+maintainers:
+- github: starsareintherose
+  email: starsareintherose@outlook.com
+repo_depends:
+- r-a4base
+- r-a4classif
+- r-a4core
+- r-a4preproc
+- r-a4reporting
+update_on:
+- regex: a4_([\d._-]+).tar.gz
+  source: regex
+  url: https://bioconductor.org/packages/a4

prepare/r-a4base/PKGBUILD

@@ -0,0 +1,44 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=a4Base
+_pkgver=1.42.0
+pkgname=r-${_pkgname,,}
+pkgver=${_pkgver//[:-]/.}
+pkgrel=1
+pkgdesc='Automated Affymetrix Array Analysis Base Package'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('GPL')
+depends=(
+  r
+  r-a4core
+  r-a4preproc
+  r-annaffy
+  r-biobase
+  r-genefilter
+  r-glmnet
+  r-gplots
+  r-limma
+  r-mpm
+  r-multtest
+)
+optdepends=(
+  r-all
+  r-cairo
+  r-gridsvg
+  r-hgu95av2.db
+  r-javagd
+  r-nlcv
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('a')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et:

prepare/r-a4base/lilac.py

@@ -0,0 +1,12 @@
+#!/usr/bin/env python3
+from lilaclib import *
+
+def pre_build():
+    for line in edit_file('PKGBUILD'):
+        if line.startswith('_pkgver='):
+            line = f'_pkgver={_G.newver}'
+        print(line)
+    update_pkgver_and_pkgrel(_G.newver.replace(':', '.').replace('-', '.'))
+
+def post_build():
+    git_pkgbuild_commit()

prepare/r-a4base/lilac.yaml

@@ -0,0 +1,19 @@
+build_prefix: extra-x86_64
+maintainers:
+- github: starsareintherose
+  email: starsareintherose@outlook.com
+repo_depends:
+- r-a4core
+- r-a4preproc
+- r-annaffy
+- r-biobase
+- r-genefilter
+- r-glmnet
+- r-gplots
+- r-limma
+- r-mpm
+- r-multtest
+update_on:
+- regex: a4Base_([\d._-]+).tar.gz
+  source: regex
+  url: https://bioconductor.org/packages/a4Base

prepare/r-a4classif/PKGBUILD

@@ -0,0 +1,39 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=a4Classif
+_pkgver=1.42.0
+pkgname=r-${_pkgname,,}
+pkgver=${_pkgver//[:-]/.}
+pkgrel=1
+pkgdesc='Automated Affymetrix Array Analysis Classification Package'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('GPL')
+depends=(
+  r
+  r-a4core
+  r-a4preproc
+  r-biobase
+  r-glmnet
+  r-pamr
+  r-rocr
+  r-varselrf
+)
+optdepends=(
+  r-all
+  r-hgu95av2.db
+  r-knitr
+  r-rmarkdown
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('a')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et:

prepare/r-a4classif/lilac.py

@@ -0,0 +1,12 @@
+#!/usr/bin/env python3
+from lilaclib import *
+
+def pre_build():
+    for line in edit_file('PKGBUILD'):
+        if line.startswith('_pkgver='):
+            line = f'_pkgver={_G.newver}'
+        print(line)
+    update_pkgver_and_pkgrel(_G.newver.replace(':', '.').replace('-', '.'))
+
+def post_build():
+    git_pkgbuild_commit()

prepare/r-a4classif/lilac.yaml

@@ -0,0 +1,16 @@
+build_prefix: extra-x86_64
+maintainers:
+- github: starsareintherose
+  email: starsareintherose@outlook.com
+repo_depends:
+- r-a4core
+- r-a4preproc
+- r-biobase
+- r-glmnet
+- r-pamr
+- r-rocr
+- r-varselrf
+update_on:
+- regex: a4Classif_([\d._-]+).tar.gz
+  source: regex
+  url: https://bioconductor.org/packages/a4Classif

prepare/r-a4core/PKGBUILD

@@ -0,0 +1,32 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=a4Core
+_pkgver=1.42.0
+pkgname=r-${_pkgname,,}
+pkgver=${_pkgver//[:-]/.}
+pkgrel=1
+pkgdesc='Automated Affymetrix Array Analysis Core Package'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('GPL')
+depends=(
+  r
+  r-biobase
+  r-glmnet
+)
+optdepends=(
+  r-knitr
+  r-rmarkdown
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('a')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et:

prepare/r-a4core/lilac.py

@@ -0,0 +1,12 @@
+#!/usr/bin/env python3
+from lilaclib import *
+
+def pre_build():
+    for line in edit_file('PKGBUILD'):
+        if line.startswith('_pkgver='):
+            line = f'_pkgver={_G.newver}'
+        print(line)
+    update_pkgver_and_pkgrel(_G.newver.replace(':', '.').replace('-', '.'))
+
+def post_build():
+    git_pkgbuild_commit()

prepare/r-a4core/lilac.yaml

@@ -0,0 +1,11 @@
+build_prefix: extra-x86_64
+maintainers:
+- github: starsareintherose
+  email: starsareintherose@outlook.com
+repo_depends:
+- r-biobase
+- r-glmnet
+update_on:
+- regex: a4Core_([\d._-]+).tar.gz
+  source: regex
+  url: https://bioconductor.org/packages/a4Core

prepare/r-a4preproc/PKGBUILD

@@ -0,0 +1,34 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=a4Preproc
+_pkgver=1.42.0
+pkgname=r-${_pkgname,,}
+pkgver=${_pkgver//[:-]/.}
+pkgrel=1
+pkgdesc='Automated Affymetrix Array Analysis Preprocessing Package'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('GPL')
+depends=(
+  r
+  r-biobase
+  r-biocgenerics
+)
+optdepends=(
+  r-all
+  r-hgu95av2.db
+  r-knitr
+  r-rmarkdown
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('a')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et:

prepare/r-a4preproc/lilac.py

@@ -0,0 +1,12 @@
+#!/usr/bin/env python3
+from lilaclib import *
+
+def pre_build():
+    for line in edit_file('PKGBUILD'):
+        if line.startswith('_pkgver='):
+            line = f'_pkgver={_G.newver}'
+        print(line)
+    update_pkgver_and_pkgrel(_G.newver.replace(':', '.').replace('-', '.'))
+
+def post_build():
+    git_pkgbuild_commit()

prepare/r-a4preproc/lilac.yaml

@@ -0,0 +1,11 @@
+build_prefix: extra-x86_64
+maintainers:
+- github: starsareintherose
+  email: starsareintherose@outlook.com
+repo_depends:
+- r-biobase
+- r-biocgenerics
+update_on:
+- regex: a4Preproc_([\d._-]+).tar.gz
+  source: regex
+  url: https://bioconductor.org/packages/a4Preproc

prepare/r-a4reporting/PKGBUILD

@@ -0,0 +1,31 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=a4Reporting
+_pkgver=1.42.0
+pkgname=r-${_pkgname,,}
+pkgver=${_pkgver//[:-]/.}
+pkgrel=1
+pkgdesc='Automated Affymetrix Array Analysis Reporting Package'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('GPL')
+depends=(
+  r
+  r-xtable
+)
+optdepends=(
+  r-knitr
+  r-rmarkdown
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('a')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et:

prepare/r-a4reporting/lilac.py

@@ -0,0 +1,12 @@
+#!/usr/bin/env python3
+from lilaclib import *
+
+def pre_build():
+    for line in edit_file('PKGBUILD'):
+        if line.startswith('_pkgver='):
+            line = f'_pkgver={_G.newver}'
+        print(line)
+    update_pkgver_and_pkgrel(_G.newver.replace(':', '.').replace('-', '.'))
+
+def post_build():
+    git_pkgbuild_commit()

prepare/r-a4reporting/lilac.yaml

@@ -0,0 +1,10 @@
+build_prefix: extra-x86_64
+maintainers:
+- github: starsareintherose
+  email: starsareintherose@outlook.com
+repo_depends:
+- r-xtable
+update_on:
+- regex: a4Reporting_([\d._-]+).tar.gz
+  source: regex
+  url: https://bioconductor.org/packages/a4Reporting

prepare/r-abadata/PKGBUILD

@@ -0,0 +1,31 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=ABAData
+_pkgver=1.24.0
+pkgname=r-${_pkgname,,}
+pkgver=${_pkgver//[:-]/.}
+pkgrel=1
+pkgdesc='Averaged gene expression in human brain regions from Allen Brain Atlas'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('GPL')
+depends=(
+  r
+)
+optdepends=(
+  r-abaenrichment
+  r-biocstyle
+  r-knitr
+)
+source=("https://bioconductor.org/packages/release/data/experiment/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('a')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et:

prepare/r-abadata/lilac.py

@@ -0,0 +1,12 @@
+#!/usr/bin/env python3
+from lilaclib import *
+
+def pre_build():
+    for line in edit_file('PKGBUILD'):
+        if line.startswith('_pkgver='):
+            line = f'_pkgver={_G.newver}'
+        print(line)
+    update_pkgver_and_pkgrel(_G.newver.replace(':', '.').replace('-', '.'))
+
+def post_build():
+    git_pkgbuild_commit()

prepare/r-abadata/lilac.yaml

@@ -0,0 +1,8 @@
+build_prefix: extra-x86_64
+maintainers:
+- github: starsareintherose
+  email: starsareintherose@outlook.com
+update_on:
+- regex: ABAData_([\d._-]+).tar.gz
+  source: regex
+  url: https://bioconductor.org/packages/ABAData

prepare/r-abaenrichment/PKGBUILD

@@ -0,0 +1,37 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=ABAEnrichment
+_pkgver=1.24.0
+pkgname=r-${_pkgname,,}
+pkgver=${_pkgver//[:-]/.}
+pkgrel=1
+pkgdesc='Gene expression enrichment in human brain regions'
+arch=('x86_64')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('GPL')
+depends=(
+  r
+  r-abadata
+  r-data.table
+  r-gofuncr
+  r-gplots
+  r-gtools
+  r-rcpp
+)
+optdepends=(
+  r-biocstyle
+  r-knitr
+  r-testthat
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('a')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et:

prepare/r-abaenrichment/lilac.py

@@ -0,0 +1,12 @@
+#!/usr/bin/env python3
+from lilaclib import *
+
+def pre_build():
+    for line in edit_file('PKGBUILD'):
+        if line.startswith('_pkgver='):
+            line = f'_pkgver={_G.newver}'
+        print(line)
+    update_pkgver_and_pkgrel(_G.newver.replace(':', '.').replace('-', '.'))
+
+def post_build():
+    git_pkgbuild_commit()

prepare/r-abaenrichment/lilac.yaml

@@ -0,0 +1,15 @@
+build_prefix: extra-x86_64
+maintainers:
+- github: starsareintherose
+  email: starsareintherose@outlook.com
+repo_depends:
+- r-abadata
+- r-data.table
+- r-gofuncr
+- r-gplots
+- r-gtools
+- r-rcpp
+update_on:
+- regex: ABAEnrichment_([\d._-]+).tar.gz
+  source: regex
+  url: https://bioconductor.org/packages/ABAEnrichment

prepare/r-abarray/PKGBUILD

@@ -0,0 +1,32 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=ABarray
+_pkgver=1.62.0
+pkgname=r-${_pkgname,,}
+pkgver=${_pkgver//[:-]/.}
+pkgrel=1
+pkgdesc='Microarray QA and statistical data analysis for Applied Biosystems Genome Survey Microrarray (AB1700) gene expression data.'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('GPL')
+depends=(
+  r
+  r-biobase
+  r-multtest
+)
+optdepends=(
+  r-limma
+  r-lpe
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('a')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et:

prepare/r-abarray/lilac.py

@@ -0,0 +1,12 @@
+#!/usr/bin/env python3
+from lilaclib import *
+
+def pre_build():
+    for line in edit_file('PKGBUILD'):
+        if line.startswith('_pkgver='):
+            line = f'_pkgver={_G.newver}'
+        print(line)
+    update_pkgver_and_pkgrel(_G.newver.replace(':', '.').replace('-', '.'))
+
+def post_build():
+    git_pkgbuild_commit()

prepare/r-abarray/lilac.yaml

@@ -0,0 +1,11 @@
+build_prefix: extra-x86_64
+maintainers:
+- github: starsareintherose
+  email: starsareintherose@outlook.com
+repo_depends:
+- r-biobase
+- r-multtest
+update_on:
+- regex: ABarray_([\d._-]+).tar.gz
+  source: regex
+  url: https://bioconductor.org/packages/ABarray

prepare/r-abind/PKGBUILD

@@ -0,0 +1,26 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=abind
+_pkgver=1.4-5
+pkgname=r-${_pkgname,,}
+pkgver=${_pkgver//[:-]/.}
+pkgrel=1
+pkgdesc='Combine Multidimensional Arrays'
+arch=('any')
+url="https://cran.r-project.org/package=${_pkgname}"
+license=('LGPL')
+depends=(
+  r
+)
+source=("https://cran.r-project.org/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('a')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et:

prepare/r-abind/lilac.py

@@ -0,0 +1,12 @@
+#!/usr/bin/env python3
+from lilaclib import *
+
+def pre_build():
+    for line in edit_file('PKGBUILD'):
+        if line.startswith('_pkgver='):
+            line = f'_pkgver={_G.newver}'
+        print(line)
+    update_pkgver_and_pkgrel(_G.newver.replace(':', '.').replace('-', '.'))
+
+def post_build():
+    git_pkgbuild_commit()

prepare/r-abind/lilac.yaml

@@ -0,0 +1,8 @@
+build_prefix: extra-x86_64
+maintainers:
+- github: starsareintherose
+  email: starsareintherose@outlook.com
+update_on:
+- regex: abind_([\d._-]+).tar.gz
+  source: regex
+  url: https://cran.r-project.org/package=abind

prepare/r-abseqr/PKGBUILD

@@ -0,0 +1,48 @@
+# system requirements: pandoc (>= 1.19.2.1)
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=abseqR
+_pkgver=1.12.0
+pkgname=r-${_pkgname,,}
+pkgver=${_pkgver//[:-]/.}
+pkgrel=1
+pkgdesc='Reporting and data analysis functionalities for Rep-Seq datasets of antibody libraries'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('GPL')
+depends=(
+  r
+  r-biocparallel
+  r-biocstyle
+  r-circlize
+  r-flexdashboard
+  r-ggcorrplot
+  r-ggdendro
+  r-ggplot2
+  r-gridextra
+  r-knitr
+  r-plotly
+  r-plyr
+  r-png
+  r-rcolorbrewer
+  r-reshape2
+  r-rmarkdown
+  r-stringr
+  r-vegan
+  r-venndiagram
+)
+optdepends=(
+  r-testthat
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('a')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et:

prepare/r-abseqr/lilac.py

@@ -0,0 +1,12 @@
+#!/usr/bin/env python3
+from lilaclib import *
+
+def pre_build():
+    for line in edit_file('PKGBUILD'):
+        if line.startswith('_pkgver='):
+            line = f'_pkgver={_G.newver}'
+        print(line)
+    update_pkgver_and_pkgrel(_G.newver.replace(':', '.').replace('-', '.'))
+
+def post_build():
+    git_pkgbuild_commit()

prepare/r-abseqr/lilac.yaml

@@ -0,0 +1,27 @@
+build_prefix: extra-x86_64
+maintainers:
+- github: starsareintherose
+  email: starsareintherose@outlook.com
+repo_depends:
+- r-biocparallel
+- r-biocstyle
+- r-circlize
+- r-flexdashboard
+- r-ggcorrplot
+- r-ggdendro
+- r-ggplot2
+- r-gridextra
+- r-knitr
+- r-plotly
+- r-plyr
+- r-png
+- r-rcolorbrewer
+- r-reshape2
+- r-rmarkdown
+- r-stringr
+- r-vegan
+- r-venndiagram
+update_on:
+- regex: abseqR_([\d._-]+).tar.gz
+  source: regex
+  url: https://bioconductor.org/packages/abseqR

prepare/r-absseq/PKGBUILD

@@ -0,0 +1,31 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=ABSSeq
+_pkgver=1.48.0
+pkgname=r-${_pkgname,,}
+pkgver=${_pkgver//[:-]/.}
+pkgrel=1
+pkgdesc='ABSSeq: a new RNA-Seq analysis method based on modelling absolute expression differences'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('GPL')
+depends=(
+  r
+  r-limma
+  r-locfit
+)
+optdepends=(
+  r-edger
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('a')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et:

prepare/r-absseq/lilac.py

@@ -0,0 +1,12 @@
+#!/usr/bin/env python3
+from lilaclib import *
+
+def pre_build():
+    for line in edit_file('PKGBUILD'):
+        if line.startswith('_pkgver='):
+            line = f'_pkgver={_G.newver}'
+        print(line)
+    update_pkgver_and_pkgrel(_G.newver.replace(':', '.').replace('-', '.'))
+
+def post_build():
+    git_pkgbuild_commit()

prepare/r-absseq/lilac.yaml

@@ -0,0 +1,11 @@
+build_prefix: extra-x86_64
+maintainers:
+- github: starsareintherose
+  email: starsareintherose@outlook.com
+repo_depends:
+- r-limma
+- r-locfit
+update_on:
+- regex: ABSSeq_([\d._-]+).tar.gz
+  source: regex
+  url: https://bioconductor.org/packages/ABSSeq

prepare/r-acde/PKGBUILD

@@ -0,0 +1,30 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=acde
+_pkgver=1.24.0
+pkgname=r-${_pkgname,,}
+pkgver=${_pkgver//[:-]/.}
+pkgrel=1
+pkgdesc='Artificial Components Detection of Differentially Expressed Genes'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('GPL')
+depends=(
+  r
+)
+optdepends=(
+  r-biocgenerics
+  r-runit
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('a')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et:

prepare/r-acde/lilac.py

@@ -0,0 +1,12 @@
+#!/usr/bin/env python3
+from lilaclib import *
+
+def pre_build():
+    for line in edit_file('PKGBUILD'):
+        if line.startswith('_pkgver='):
+            line = f'_pkgver={_G.newver}'
+        print(line)
+    update_pkgver_and_pkgrel(_G.newver.replace(':', '.').replace('-', '.'))
+
+def post_build():
+    git_pkgbuild_commit()

prepare/r-acde/lilac.yaml

@@ -0,0 +1,8 @@
+build_prefix: extra-x86_64
+maintainers:
+- github: starsareintherose
+  email: starsareintherose@outlook.com
+update_on:
+- regex: acde_([\d._-]+).tar.gz
+  source: regex
+  url: https://bioconductor.org/packages/acde

prepare/r-ace/PKGBUILD

@@ -0,0 +1,35 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=ACE
+_pkgver=1.12.0
+pkgname=r-${_pkgname,,}
+pkgver=${_pkgver//[:-]/.}
+pkgrel=1
+pkgdesc='Absolute Copy Number Estimation from Low-coverage Whole Genome Sequencing'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('GPL')
+depends=(
+  r
+  r-biobase
+  r-genomicranges
+  r-ggplot2
+  r-qdnaseq
+)
+optdepends=(
+  r-biocstyle
+  r-knitr
+  r-rmarkdown
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('a')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et:

prepare/r-ace/lilac.py

@@ -0,0 +1,12 @@
+#!/usr/bin/env python3
+from lilaclib import *
+
+def pre_build():
+    for line in edit_file('PKGBUILD'):
+        if line.startswith('_pkgver='):
+            line = f'_pkgver={_G.newver}'
+        print(line)
+    update_pkgver_and_pkgrel(_G.newver.replace(':', '.').replace('-', '.'))
+
+def post_build():
+    git_pkgbuild_commit()

prepare/r-ace/lilac.yaml

@@ -0,0 +1,13 @@
+build_prefix: extra-x86_64
+maintainers:
+- github: starsareintherose
+  email: starsareintherose@outlook.com
+repo_depends:
+- r-biobase
+- r-genomicranges
+- r-ggplot2
+- r-qdnaseq
+update_on:
+- regex: ACE_([\d._-]+).tar.gz
+  source: regex
+  url: https://bioconductor.org/packages/ACE

prepare/r-acgh/PKGBUILD

@@ -0,0 +1,28 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=aCGH
+_pkgver=1.72.0
+pkgname=r-${_pkgname,,}
+pkgver=${_pkgver//[:-]/.}
+pkgrel=1
+pkgdesc='Classes and functions for Array Comparative Genomic Hybridization data'
+arch=('x86_64')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('GPL')
+depends=(
+  r
+  r-biobase
+  r-multtest
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('a')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et:

prepare/r-acgh/lilac.py

@@ -0,0 +1,12 @@
+#!/usr/bin/env python3
+from lilaclib import *
+
+def pre_build():
+    for line in edit_file('PKGBUILD'):
+        if line.startswith('_pkgver='):
+            line = f'_pkgver={_G.newver}'
+        print(line)
+    update_pkgver_and_pkgrel(_G.newver.replace(':', '.').replace('-', '.'))
+
+def post_build():
+    git_pkgbuild_commit()

prepare/r-acgh/lilac.yaml

@@ -0,0 +1,11 @@
+build_prefix: extra-x86_64
+maintainers:
+- github: starsareintherose
+  email: starsareintherose@outlook.com
+repo_depends:
+- r-biobase
+- r-multtest
+update_on:
+- regex: aCGH_([\d._-]+).tar.gz
+  source: regex
+  url: https://bioconductor.org/packages/aCGH

prepare/r-acme/PKGBUILD

@@ -0,0 +1,28 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=ACME
+_pkgver=2.50.0
+pkgname=r-${_pkgname,,}
+pkgver=${_pkgver//[:-]/.}
+pkgrel=1
+pkgdesc='Algorithms for Calculating Microarray Enrichment (ACME)'
+arch=('x86_64')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('GPL')
+depends=(
+  r
+  r-biobase
+  r-biocgenerics
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('a')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et:

prepare/r-acme/lilac.py

@@ -0,0 +1,12 @@
+#!/usr/bin/env python3
+from lilaclib import *
+
+def pre_build():
+    for line in edit_file('PKGBUILD'):
+        if line.startswith('_pkgver='):
+            line = f'_pkgver={_G.newver}'
+        print(line)
+    update_pkgver_and_pkgrel(_G.newver.replace(':', '.').replace('-', '.'))
+
+def post_build():
+    git_pkgbuild_commit()

prepare/r-acme/lilac.yaml

@@ -0,0 +1,11 @@
+build_prefix: extra-x86_64
+maintainers:
+- github: starsareintherose
+  email: starsareintherose@outlook.com
+repo_depends:
+- r-biobase
+- r-biocgenerics
+update_on:
+- regex: ACME_([\d._-]+).tar.gz
+  source: regex
+  url: https://bioconductor.org/packages/ACME

prepare/r-ada/PKGBUILD

@@ -0,0 +1,26 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=ada
+_pkgver=2.0-5
+pkgname=r-${_pkgname,,}
+pkgver=${_pkgver//[:-]/.}
+pkgrel=1
+pkgdesc='The R Package Ada for Stochastic Boosting'
+arch=('any')
+url="https://cran.r-project.org/package=${_pkgname}"
+license=('GPL')
+depends=(
+  r
+)
+source=("https://cran.r-project.org/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('a')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et:

prepare/r-ada/lilac.py

@@ -0,0 +1,12 @@
+#!/usr/bin/env python3
+from lilaclib import *
+
+def pre_build():
+    for line in edit_file('PKGBUILD'):
+        if line.startswith('_pkgver='):
+            line = f'_pkgver={_G.newver}'
+        print(line)
+    update_pkgver_and_pkgrel(_G.newver.replace(':', '.').replace('-', '.'))
+
+def post_build():
+    git_pkgbuild_commit()

prepare/r-ada/lilac.yaml

@@ -0,0 +1,8 @@
+build_prefix: extra-x86_64
+maintainers:
+- github: starsareintherose
+  email: starsareintherose@outlook.com
+update_on:
+- regex: ada_([\d._-]+).tar.gz
+  source: regex
+  url: https://cran.r-project.org/package=ada

prepare/r-adabag/PKGBUILD

@@ -0,0 +1,32 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=adabag
+_pkgver=4.2
+pkgname=r-${_pkgname,,}
+pkgver=${_pkgver//[:-]/.}
+pkgrel=1
+pkgdesc='Applies Multiclass AdaBoost.M1, SAMME and Bagging'
+arch=('any')
+url="https://cran.r-project.org/package=${_pkgname}"
+license=('GPL')
+depends=(
+  r
+  r-caret
+  r-doparallel
+  r-foreach
+)
+optdepends=(
+  r-mlbench
+)
+source=("https://cran.r-project.org/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('a')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et:

prepare/r-adabag/lilac.py

@@ -0,0 +1,12 @@
+#!/usr/bin/env python3
+from lilaclib import *
+
+def pre_build():
+    for line in edit_file('PKGBUILD'):
+        if line.startswith('_pkgver='):
+            line = f'_pkgver={_G.newver}'
+        print(line)
+    update_pkgver_and_pkgrel(_G.newver.replace(':', '.').replace('-', '.'))
+
+def post_build():
+    git_pkgbuild_commit()

prepare/r-adabag/lilac.yaml

@@ -0,0 +1,12 @@
+build_prefix: extra-x86_64
+maintainers:
+- github: starsareintherose
+  email: starsareintherose@outlook.com
+repo_depends:
+- r-caret
+- r-doparallel
+- r-foreach
+update_on:
+- regex: adabag_([\d._-]+).tar.gz
+  source: regex
+  url: https://cran.r-project.org/package=adabag

prepare/r-adacgh2/PKGBUILD

@@ -0,0 +1,41 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=ADaCGH2
+_pkgver=2.34.0
+pkgname=r-${_pkgname,,}
+pkgver=${_pkgver//[:-]/.}
+pkgrel=1
+pkgdesc='Analysis of big data from aCGH experiments using parallel computing and ff objects'
+arch=('x86_64')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('GPL')
+depends=(
+  r
+  r-acgh
+  r-bit
+  r-dnacopy
+  r-ff
+  r-ffbase
+  r-glad
+  r-snapcgh
+  r-tilingarray
+  r-waveslim
+)
+optdepends=(
+  r-cairo
+  r-cghregions
+  r-limma
+  r-rmpi
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('a')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et:

prepare/r-adacgh2/lilac.py

@@ -0,0 +1,12 @@
+#!/usr/bin/env python3
+from lilaclib import *
+
+def pre_build():
+    for line in edit_file('PKGBUILD'):
+        if line.startswith('_pkgver='):
+            line = f'_pkgver={_G.newver}'
+        print(line)
+    update_pkgver_and_pkgrel(_G.newver.replace(':', '.').replace('-', '.'))
+
+def post_build():
+    git_pkgbuild_commit()

prepare/r-adacgh2/lilac.yaml

@@ -0,0 +1,18 @@
+build_prefix: extra-x86_64
+maintainers:
+- github: starsareintherose
+  email: starsareintherose@outlook.com
+repo_depends:
+- r-acgh
+- r-bit
+- r-dnacopy
+- r-ff
+- r-ffbase
+- r-glad
+- r-snapcgh
+- r-tilingarray
+- r-waveslim
+update_on:
+- regex: ADaCGH2_([\d._-]+).tar.gz
+  source: regex
+  url: https://bioconductor.org/packages/ADaCGH2

prepare/r-adam/PKGBUILD

@@ -0,0 +1,40 @@
+# system requirements: C++11
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=ADAM
+_pkgver=1.10.0
+pkgname=r-${_pkgname,,}
+pkgver=${_pkgver//[:-]/.}
+pkgrel=1
+pkgdesc='ADAM: Activity and Diversity Analysis Module'
+arch=('x86_64')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('GPL')
+depends=(
+  r
+  r-dplyr
+  r-dt
+  r-go.db
+  r-keggrest
+  r-knitr
+  r-pbapply
+  r-rcpp
+  r-stringr
+  r-summarizedexperiment
+)
+optdepends=(
+  r-rmarkdown
+  r-testthat
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('a')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et:

prepare/r-adam/lilac.py

@@ -0,0 +1,12 @@
+#!/usr/bin/env python3
+from lilaclib import *
+
+def pre_build():
+    for line in edit_file('PKGBUILD'):
+        if line.startswith('_pkgver='):
+            line = f'_pkgver={_G.newver}'
+        print(line)
+    update_pkgver_and_pkgrel(_G.newver.replace(':', '.').replace('-', '.'))
+
+def post_build():
+    git_pkgbuild_commit()

prepare/r-adam/lilac.yaml

@@ -0,0 +1,18 @@
+build_prefix: extra-x86_64
+maintainers:
+- github: starsareintherose
+  email: starsareintherose@outlook.com
+repo_depends:
+- r-dplyr
+- r-dt
+- r-go.db
+- r-keggrest
+- r-knitr
+- r-pbapply
+- r-rcpp
+- r-stringr
+- r-summarizedexperiment
+update_on:
+- regex: ADAM_([\d._-]+).tar.gz
+  source: regex
+  url: https://bioconductor.org/packages/ADAM

prepare/r-adamgui/PKGBUILD

@@ -0,0 +1,50 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=ADAMgui
+_pkgver=1.10.0
+pkgname=r-${_pkgname,,}
+pkgver=${_pkgver//[:-]/.}
+pkgrel=1
+pkgdesc='Activity and Diversity Analysis Module Graphical User Interface'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('GPL')
+depends=(
+  r
+  r-adam
+  r-colorramps
+  r-data.table
+  r-dplyr
+  r-dt
+  r-ggplot2
+  r-ggpubr
+  r-ggrepel
+  r-ggsignif
+  r-go.db
+  r-gridextra
+  r-knitr
+  r-rcolorbrewer
+  r-reshape2
+  r-shiny
+  r-shinyjs
+  r-stringi
+  r-stringr
+  r-testthat
+  r-varhandle
+)
+optdepends=(
+  r-biocstyle
+  r-markdown
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('a')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et:

prepare/r-adamgui/lilac.py

@@ -0,0 +1,12 @@
+#!/usr/bin/env python3
+from lilaclib import *
+
+def pre_build():
+    for line in edit_file('PKGBUILD'):
+        if line.startswith('_pkgver='):
+            line = f'_pkgver={_G.newver}'
+        print(line)
+    update_pkgver_and_pkgrel(_G.newver.replace(':', '.').replace('-', '.'))
+
+def post_build():
+    git_pkgbuild_commit()

prepare/r-adamgui/lilac.yaml

@@ -0,0 +1,29 @@
+build_prefix: extra-x86_64
+maintainers:
+- github: starsareintherose
+  email: starsareintherose@outlook.com
+repo_depends:
+- r-adam
+- r-colorramps
+- r-data.table
+- r-dplyr
+- r-dt
+- r-ggplot2
+- r-ggpubr
+- r-ggrepel
+- r-ggsignif
+- r-go.db
+- r-gridextra
+- r-knitr
+- r-rcolorbrewer
+- r-reshape2
+- r-shiny
+- r-shinyjs
+- r-stringi
+- r-stringr
+- r-testthat
+- r-varhandle
+update_on:
+- regex: ADAMgui_([\d._-]+).tar.gz
+  source: regex
+  url: https://bioconductor.org/packages/ADAMgui

prepare/r-adaptgauss/PKGBUILD

@@ -0,0 +1,41 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=AdaptGauss
+_pkgver=1.5.6
+pkgname=r-${_pkgname,,}
+pkgver=${_pkgver//[:-]/.}
+pkgrel=1
+pkgdesc='Gaussian Mixture Models (GMM)'
+arch=('x86_64')
+url="https://cran.r-project.org/package=${_pkgname}"
+license=('GPL')
+depends=(
+  r
+  r-datavisualizations
+  r-pracma
+  r-rcpp
+  r-shiny
+)
+optdepends=(
+  r-dqrng
+  r-foreach
+  r-ggplot2
+  r-grid
+  r-knitr
+  r-mclust
+  r-paralleldist
+  r-reshape2
+  r-rmarkdown
+)
+source=("https://cran.r-project.org/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('a')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et:

prepare/r-adaptgauss/lilac.py

@@ -0,0 +1,12 @@
+#!/usr/bin/env python3
+from lilaclib import *
+
+def pre_build():
+    for line in edit_file('PKGBUILD'):
+        if line.startswith('_pkgver='):
+            line = f'_pkgver={_G.newver}'
+        print(line)
+    update_pkgver_and_pkgrel(_G.newver.replace(':', '.').replace('-', '.'))
+
+def post_build():
+    git_pkgbuild_commit()

prepare/r-adaptgauss/lilac.yaml

@@ -0,0 +1,13 @@
+build_prefix: extra-x86_64
+maintainers:
+- github: starsareintherose
+  email: starsareintherose@outlook.com
+repo_depends:
+- r-datavisualizations
+- r-pracma
+- r-rcpp
+- r-shiny
+update_on:
+- regex: AdaptGauss_([\d._-]+).tar.gz
+  source: regex
+  url: https://cran.r-project.org/package=AdaptGauss

prepare/r-additivitytests/PKGBUILD

@@ -0,0 +1,29 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=additivityTests
+_pkgver=1.1-4
+pkgname=r-${_pkgname,,}
+pkgver=${_pkgver//[:-]/.}
+pkgrel=1
+pkgdesc='Additivity Tests in the Two Way Anova with Single Sub-class Numbers'
+arch=('any')
+url="https://cran.r-project.org/package=${_pkgname}"
+license=('GPL')
+depends=(
+  r
+)
+optdepends=(
+  r-knitr
+)
+source=("https://cran.r-project.org/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('a')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et:

prepare/r-additivitytests/lilac.py

@@ -0,0 +1,12 @@
+#!/usr/bin/env python3
+from lilaclib import *
+
+def pre_build():
+    for line in edit_file('PKGBUILD'):
+        if line.startswith('_pkgver='):
+            line = f'_pkgver={_G.newver}'
+        print(line)
+    update_pkgver_and_pkgrel(_G.newver.replace(':', '.').replace('-', '.'))
+
+def post_build():
+    git_pkgbuild_commit()

prepare/r-additivitytests/lilac.yaml

@@ -0,0 +1,8 @@
+build_prefix: extra-x86_64
+maintainers:
+- github: starsareintherose
+  email: starsareintherose@outlook.com
+update_on:
+- regex: additivityTests_([\d._-]+).tar.gz
+  source: regex
+  url: https://cran.r-project.org/package=additivityTests

prepare/r-adductdata/PKGBUILD

@@ -0,0 +1,32 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=adductData
+_pkgver=1.10.0
+pkgname=r-${_pkgname,,}
+pkgver=${_pkgver//[:-]/.}
+pkgrel=1
+pkgdesc='Data from untargeted MS of modifications to Cys34 of serum albumin'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('Artistic2.0')
+depends=(
+  r
+  r-annotationhub
+  r-experimenthub
+)
+optdepends=(
+  r-knitr
+  r-rmarkdown
+)
+source=("https://bioconductor.org/packages/release/data/experiment/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('a')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et:

prepare/r-adductdata/lilac.py

@@ -0,0 +1,12 @@
+#!/usr/bin/env python3
+from lilaclib import *
+
+def pre_build():
+    for line in edit_file('PKGBUILD'):
+        if line.startswith('_pkgver='):
+            line = f'_pkgver={_G.newver}'
+        print(line)
+    update_pkgver_and_pkgrel(_G.newver.replace(':', '.').replace('-', '.'))
+
+def post_build():
+    git_pkgbuild_commit()

prepare/r-adductdata/lilac.yaml

@@ -0,0 +1,11 @@
+build_prefix: extra-x86_64
+maintainers:
+- github: starsareintherose
+  email: starsareintherose@outlook.com
+repo_depends:
+- r-annotationhub
+- r-experimenthub
+update_on:
+- regex: adductData_([\d._-]+).tar.gz
+  source: regex
+  url: https://bioconductor.org/packages/adductData

prepare/r-adductomicsr/PKGBUILD

@@ -0,0 +1,53 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=adductomicsR
+_pkgver=1.10.0
+pkgname=r-${_pkgname,,}
+pkgver=${_pkgver//[:-]/.}
+pkgrel=1
+pkgdesc='Processing of adductomic mass spectral datasets'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('Artistic2.0')
+depends=(
+  r
+  r-adductdata
+  r-ade4
+  r-annotationhub
+  r-bootstrap
+  r-data.table
+  r-dosnow
+  r-dplyr
+  r-dt
+  r-experimenthub
+  r-fastcluster
+  r-foreach
+  r-fpc
+  r-mzr
+  r-orgmassspecr
+  r-pastecs
+  r-pracma
+  r-rcppeigen
+  r-reshape2
+  r-rvest
+  r-smoother
+  r-zoo
+)
+optdepends=(
+  r-knitr
+  r-rdisop
+  r-rmarkdown
+  r-testthat
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('a')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et:

prepare/r-adductomicsr/lilac.py

@@ -0,0 +1,12 @@
+#!/usr/bin/env python3
+from lilaclib import *
+
+def pre_build():
+    for line in edit_file('PKGBUILD'):
+        if line.startswith('_pkgver='):
+            line = f'_pkgver={_G.newver}'
+        print(line)
+    update_pkgver_and_pkgrel(_G.newver.replace(':', '.').replace('-', '.'))
+
+def post_build():
+    git_pkgbuild_commit()

prepare/r-adductomicsr/lilac.yaml

@@ -0,0 +1,30 @@
+build_prefix: extra-x86_64
+maintainers:
+- github: starsareintherose
+  email: starsareintherose@outlook.com
+repo_depends:
+- r-adductdata
+- r-ade4
+- r-annotationhub
+- r-bootstrap
+- r-data.table
+- r-dosnow
+- r-dplyr
+- r-dt
+- r-experimenthub
+- r-fastcluster
+- r-foreach
+- r-fpc
+- r-mzr
+- r-orgmassspecr
+- r-pastecs
+- r-pracma
+- r-rcppeigen
+- r-reshape2
+- r-rvest
+- r-smoother
+- r-zoo
+update_on:
+- regex: adductomicsR_([\d._-]+).tar.gz
+  source: regex
+  url: https://bioconductor.org/packages/adductomicsR

prepare/r-ade4/PKGBUILD

@@ -0,0 +1,45 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=ade4
+_pkgver=1.7-18
+pkgname=r-${_pkgname,,}
+pkgver=${_pkgver//[:-]/.}
+pkgrel=1
+pkgdesc='Analysis of Ecological Data: Exploratory and Euclidean Methods in Environmental Sciences'
+arch=('x86_64')
+url="https://cran.r-project.org/package=${_pkgname}"
+license=('GPL')
+depends=(
+  r
+  r-pixmap
+  r-sp
+)
+optdepends=(
+  r-ade4tkgui
+  r-adegraphics
+  r-adephylo
+  r-ape
+  r-circstats
+  r-deldir
+  r-doparallel
+  r-foreach
+  r-iterators
+  r-lattice
+  r-parallel
+  r-progress
+  r-spdep
+  r-splancs
+  r-waveslim
+)
+source=("https://cran.r-project.org/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('a')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et:

prepare/r-ade4/lilac.py

@@ -0,0 +1,12 @@
+#!/usr/bin/env python3
+from lilaclib import *
+
+def pre_build():
+    for line in edit_file('PKGBUILD'):
+        if line.startswith('_pkgver='):
+            line = f'_pkgver={_G.newver}'
+        print(line)
+    update_pkgver_and_pkgrel(_G.newver.replace(':', '.').replace('-', '.'))
+
+def post_build():
+    git_pkgbuild_commit()

prepare/r-ade4/lilac.yaml

@@ -0,0 +1,11 @@
+build_prefix: extra-x86_64
+maintainers:
+- github: starsareintherose
+  email: starsareintherose@outlook.com
+repo_depends:
+- r-pixmap
+- r-sp
+update_on:
+- regex: ade4_([\d._-]+).tar.gz
+  source: regex
+  url: https://cran.r-project.org/package=ade4

prepare/r-adehabitatlt/PKGBUILD

@@ -0,0 +1,35 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=adehabitatLT
+_pkgver=0.3.25
+pkgname=r-${_pkgname,,}
+pkgver=${_pkgver//[:-]/.}
+pkgrel=1
+pkgdesc='Analysis of Animal Movements'
+arch=('x86_64')
+url="https://cran.r-project.org/package=${_pkgname}"
+license=('GPL')
+depends=(
+  r
+  r-ade4
+  r-adehabitatma
+  r-circstats
+  r-sp
+)
+optdepends=(
+  r-maptools
+  r-mass
+  r-tkrplot
+)
+source=("https://cran.r-project.org/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('a')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et:

prepare/r-adehabitatlt/lilac.py

@@ -0,0 +1,12 @@
+#!/usr/bin/env python3
+from lilaclib import *
+
+def pre_build():
+    for line in edit_file('PKGBUILD'):
+        if line.startswith('_pkgver='):
+            line = f'_pkgver={_G.newver}'
+        print(line)
+    update_pkgver_and_pkgrel(_G.newver.replace(':', '.').replace('-', '.'))
+
+def post_build():
+    git_pkgbuild_commit()

prepare/r-adehabitatlt/lilac.yaml

@@ -0,0 +1,13 @@
+build_prefix: extra-x86_64
+maintainers:
+- github: starsareintherose
+  email: starsareintherose@outlook.com
+repo_depends:
+- r-ade4
+- r-adehabitatma
+- r-circstats
+- r-sp
+update_on:
+- regex: adehabitatLT_([\d._-]+).tar.gz
+  source: regex
+  url: https://cran.r-project.org/package=adehabitatLT

prepare/r-adehabitatma/PKGBUILD

@@ -0,0 +1,33 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=adehabitatMA
+_pkgver=0.3.14
+pkgname=r-${_pkgname,,}
+pkgver=${_pkgver//[:-]/.}
+pkgrel=1
+pkgdesc='Tools to Deal with Raster Maps'
+arch=('x86_64')
+url="https://cran.r-project.org/package=${_pkgname}"
+license=('GPL')
+depends=(
+  r
+  r-filehash
+  r-sp
+)
+optdepends=(
+  r-maptools
+  r-mass
+  r-tkrplot
+)
+source=("https://cran.r-project.org/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('a')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et:

prepare/r-adehabitatma/lilac.py

@@ -0,0 +1,12 @@
+#!/usr/bin/env python3
+from lilaclib import *
+
+def pre_build():
+    for line in edit_file('PKGBUILD'):
+        if line.startswith('_pkgver='):
+            line = f'_pkgver={_G.newver}'
+        print(line)
+    update_pkgver_and_pkgrel(_G.newver.replace(':', '.').replace('-', '.'))
+
+def post_build():
+    git_pkgbuild_commit()

prepare/r-adehabitatma/lilac.yaml

@@ -0,0 +1,11 @@
+build_prefix: extra-x86_64
+maintainers:
+- github: starsareintherose
+  email: starsareintherose@outlook.com
+repo_depends:
+- r-filehash
+- r-sp
+update_on:
+- regex: adehabitatMA_([\d._-]+).tar.gz
+  source: regex
+  url: https://cran.r-project.org/package=adehabitatMA

prepare/r-adgoftest/PKGBUILD

@@ -0,0 +1,26 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=ADGofTest
+_pkgver=0.3
+pkgname=r-${_pkgname,,}
+pkgver=${_pkgver//[:-]/.}
+pkgrel=1
+pkgdesc='Anderson-Darling GoF test'
+arch=('any')
+url="https://cran.r-project.org/package=${_pkgname}"
+license=('GPL')
+depends=(
+  r
+)
+source=("https://cran.r-project.org/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('a')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et:

prepare/r-adgoftest/lilac.py

@@ -0,0 +1,12 @@
+#!/usr/bin/env python3
+from lilaclib import *
+
+def pre_build():
+    for line in edit_file('PKGBUILD'):
+        if line.startswith('_pkgver='):
+            line = f'_pkgver={_G.newver}'
+        print(line)
+    update_pkgver_and_pkgrel(_G.newver.replace(':', '.').replace('-', '.'))
+
+def post_build():
+    git_pkgbuild_commit()

prepare/r-adgoftest/lilac.yaml

@@ -0,0 +1,8 @@
+build_prefix: extra-x86_64
+maintainers:
+- github: starsareintherose
+  email: starsareintherose@outlook.com
+update_on:
+- regex: ADGofTest_([\d._-]+).tar.gz
+  source: regex
+  url: https://cran.r-project.org/package=ADGofTest

prepare/r-adimpute/PKGBUILD

@@ -0,0 +1,42 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=ADImpute
+_pkgver=1.4.0
+pkgname=r-${_pkgname,,}
+pkgver=${_pkgver//[:-]/.}
+pkgrel=1
+pkgdesc='Adaptive Dropout Imputer (ADImpute)'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('GPL')
+depends=(
+  r
+  r-biocparallel
+  r-checkmate
+  r-data.table
+  r-drimpute
+  r-kernlab
+  r-rsvd
+  r-s4vectors
+  r-saver
+  r-singlecellexperiment
+  r-summarizedexperiment
+)
+optdepends=(
+  r-biocstyle
+  r-knitr
+  r-rmarkdown
+  r-testthat
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('a')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et:

prepare/r-adimpute/lilac.py

@@ -0,0 +1,12 @@
+#!/usr/bin/env python3
+from lilaclib import *
+
+def pre_build():
+    for line in edit_file('PKGBUILD'):
+        if line.startswith('_pkgver='):
+            line = f'_pkgver={_G.newver}'
+        print(line)
+    update_pkgver_and_pkgrel(_G.newver.replace(':', '.').replace('-', '.'))
+
+def post_build():
+    git_pkgbuild_commit()

prepare/r-adimpute/lilac.yaml

@@ -0,0 +1,19 @@
+build_prefix: extra-x86_64
+maintainers:
+- github: starsareintherose
+  email: starsareintherose@outlook.com
+repo_depends:
+- r-biocparallel
+- r-checkmate
+- r-data.table
+- r-drimpute
+- r-kernlab
+- r-rsvd
+- r-s4vectors
+- r-saver
+- r-singlecellexperiment
+- r-summarizedexperiment
+update_on:
+- regex: ADImpute_([\d._-]+).tar.gz
+  source: regex
+  url: https://bioconductor.org/packages/ADImpute

prepare/r-admisc/PKGBUILD

@@ -0,0 +1,29 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=admisc
+_pkgver=0.22
+pkgname=r-${_pkgname,,}
+pkgver=${_pkgver//[:-]/.}
+pkgrel=1
+pkgdesc="Adrian Dusa's Miscellaneous"
+arch=('x86_64')
+url="https://cran.r-project.org/package=${_pkgname}"
+license=('GPL')
+depends=(
+  r
+)
+optdepends=(
+  r-qca
+)
+source=("https://cran.r-project.org/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('a')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et:

prepare/r-admisc/lilac.py

@@ -0,0 +1,12 @@
+#!/usr/bin/env python3
+from lilaclib import *
+
+def pre_build():
+    for line in edit_file('PKGBUILD'):
+        if line.startswith('_pkgver='):
+            line = f'_pkgver={_G.newver}'
+        print(line)
+    update_pkgver_and_pkgrel(_G.newver.replace(':', '.').replace('-', '.'))
+
+def post_build():
+    git_pkgbuild_commit()

prepare/r-admisc/lilac.yaml

@@ -0,0 +1,8 @@
+build_prefix: extra-x86_64
+maintainers:
+- github: starsareintherose
+  email: starsareintherose@outlook.com
+update_on:
+- regex: admisc_([\d._-]+).tar.gz
+  source: regex
+  url: https://cran.r-project.org/package=admisc

prepare/r-adsplit/PKGBUILD

@@ -0,0 +1,36 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=adSplit
+_pkgver=1.64.0
+pkgname=r-${_pkgname,,}
+pkgver=${_pkgver//[:-]/.}
+pkgrel=1
+pkgdesc='Annotation-Driven Clustering'
+arch=('x86_64')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('GPL')
+depends=(
+  r
+  r-annotationdbi
+  r-biobase
+  r-go.db
+  r-keggrest
+  r-multtest
+)
+optdepends=(
+  r-golubesets
+  r-hu6800.db
+  r-vsn
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('a')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et:

prepare/r-adsplit/lilac.py

@@ -0,0 +1,12 @@
+#!/usr/bin/env python3
+from lilaclib import *
+
+def pre_build():
+    for line in edit_file('PKGBUILD'):
+        if line.startswith('_pkgver='):
+            line = f'_pkgver={_G.newver}'
+        print(line)
+    update_pkgver_and_pkgrel(_G.newver.replace(':', '.').replace('-', '.'))
+
+def post_build():
+    git_pkgbuild_commit()

prepare/r-adsplit/lilac.yaml

@@ -0,0 +1,14 @@
+build_prefix: extra-x86_64
+maintainers:
+- github: starsareintherose
+  email: starsareintherose@outlook.com
+repo_depends:
+- r-annotationdbi
+- r-biobase
+- r-go.db
+- r-keggrest
+- r-multtest
+update_on:
+- regex: adSplit_([\d._-]+).tar.gz
+  source: regex
+  url: https://bioconductor.org/packages/adSplit

prepare/r-affixcan/PKGBUILD

@@ -0,0 +1,35 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=AffiXcan
+_pkgver=1.12.0
+pkgname=r-${_pkgname,,}
+pkgver=${_pkgver//[:-]/.}
+pkgrel=1
+pkgdesc='A Functional Approach To Impute Genetically Regulated Expression'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('GPL')
+depends=(
+  r
+  r-biocparallel
+  r-crayon
+  r-multiassayexperiment
+  r-summarizedexperiment
+)
+optdepends=(
+  r-biocstyle
+  r-knitr
+  r-rmarkdown
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('a')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et:

prepare/r-affixcan/lilac.py

@@ -0,0 +1,12 @@
+#!/usr/bin/env python3
+from lilaclib import *
+
+def pre_build():
+    for line in edit_file('PKGBUILD'):
+        if line.startswith('_pkgver='):
+            line = f'_pkgver={_G.newver}'
+        print(line)
+    update_pkgver_and_pkgrel(_G.newver.replace(':', '.').replace('-', '.'))
+
+def post_build():
+    git_pkgbuild_commit()

prepare/r-affixcan/lilac.yaml

@@ -0,0 +1,13 @@
+build_prefix: extra-x86_64
+maintainers:
+- github: starsareintherose
+  email: starsareintherose@outlook.com
+repo_depends:
+- r-biocparallel
+- r-crayon
+- r-multiassayexperiment
+- r-summarizedexperiment
+update_on:
+- regex: AffiXcan_([\d._-]+).tar.gz
+  source: regex
+  url: https://bioconductor.org/packages/AffiXcan

prepare/r-affxparser/PKGBUILD

@@ -0,0 +1,31 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=affxparser
+_pkgver=1.66.0
+pkgname=r-${_pkgname,,}
+pkgver=${_pkgver//[:-]/.}
+pkgrel=1
+pkgdesc='Affymetrix File Parsing SDK'
+arch=('x86_64')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('LGPL')
+depends=(
+  r
+)
+optdepends=(
+  r-affymetrixdatatestfiles
+  r-r.oo
+  r-r.utils
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('a')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: