r-omicslonda: delete package

r-omicslonda is deprecated on Bioconductor and fails to build
This commit is contained in:
Pekka Ristola 2024-02-22 19:44:56 +02:00
parent cad2e56977
commit f6d704f82e
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GPG key ID: 2C20BE716E05213E
3 changed files with 0 additions and 73 deletions

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@ -1,42 +0,0 @@
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=OmicsLonDA
_pkgver=1.14.0
pkgname=r-${_pkgname,,}
pkgver=1.14.0
pkgrel=2
pkgdesc='Omics Longitudinal Differential Analysis'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('MIT')
depends=(
r
r-biocgenerics
r-biocparallel
r-ggplot2
r-gss
r-plyr
r-pracma
r-summarizedexperiment
r-zoo
)
optdepends=(
r-biocmanager
r-devtools
r-knitr
r-rmarkdown
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('4b3b44288c8b35d52b08da15d68cf11f9f252f1d4be1bdd9116b4545ef025d71')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
install -Dm644 "${_pkgname}/LICENSE" -t "${pkgdir}/usr/share/licenses/${pkgname}"
}
# vim:set ts=2 sw=2 et:

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#!/usr/bin/env python3
from lilaclib import *
def pre_build():
for line in edit_file('PKGBUILD'):
if line.startswith('_pkgver='):
line = f'_pkgver={_G.newver}'
print(line)
update_pkgver_and_pkgrel(_G.newver.replace(':', '.').replace('-', '.'))
def post_build():
git_pkgbuild_commit()
update_aur_repo()

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@ -1,18 +0,0 @@
build_prefix: extra-x86_64
maintainers:
- github: starsareintherose
email: kuoi@bioarchlinux.org
repo_depends:
- r-biocgenerics
- r-biocparallel
- r-ggplot2
- r-gss
- r-plyr
- r-pracma
- r-summarizedexperiment
- r-zoo
update_on:
- regex: OmicsLonDA_([\d._-]+).tar.gz
source: regex
url: https://bioconductor.org/packages/OmicsLonDA
- alias: r