diff --git a/BioArchLinux/stacks/PKGBUILD b/BioArchLinux/stacks/PKGBUILD
index c8f72fae80..a1d18d9c52 100644
--- a/BioArchLinux/stacks/PKGBUILD
+++ b/BioArchLinux/stacks/PKGBUILD
@@ -22,5 +22,11 @@ build() {
 package() {
   cd "${pkgname}-${pkgver}"
   make install
+
+  for pl_bin in ref_map.pl denovo_map.pl
+  do
+    sed -i "s@/build/stacks/pkg/stacks/usr/bin/@/usr/bin/" $pkgdir/usr/bin/$pl_bin
+  done
+
 }