# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>

_pkgname=puma
_pkgver=3.36.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//[:-]/.}
pkgrel=1
pkgdesc="Propagating Uncertainty in Microarray Analysis(including Affymetrix tranditional 3' arrays and exon arrays and Human Transcriptome Array 2.0)"
arch=('x86_64')
url="https://bioconductor.org/packages/${_pkgname}"
license=('LGPL')
depends=(
  r
  r-affy
  r-affyio
  r-biobase
  r-mclust
  r-oligo
  r-oligoclasses
)
optdepends=(
  r-affydata
  r-annotate
  r-limma
  r-pumadata
  r-rocr
  r-snow
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('a')

build() {
  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}

package() {
  install -dm0755 "${pkgdir}/usr/lib/R/library"
  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et: