mirror of
https://github.com/BioArchLinux/Packages.git
synced 2025-03-10 12:02:42 +00:00
43 lines
937 B
Bash
43 lines
937 B
Bash
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
|
|
|
|
_pkgname=DOSE
|
|
_pkgver=3.26.2
|
|
pkgname=r-${_pkgname,,}
|
|
pkgver=3.26.2
|
|
pkgrel=1
|
|
pkgdesc='Disease Ontology Semantic and Enrichment analysis'
|
|
arch=('any')
|
|
url="https://bioconductor.org/packages/${_pkgname}"
|
|
license=('Artistic2.0')
|
|
depends=(
|
|
r
|
|
r-annotationdbi
|
|
r-biocparallel
|
|
r-fgsea
|
|
r-ggplot2
|
|
r-gosemsim
|
|
r-hdo.db
|
|
r-qvalue
|
|
r-reshape2
|
|
)
|
|
optdepends=(
|
|
r-clusterprofiler
|
|
r-gson
|
|
r-knitr
|
|
r-org.hs.eg.db
|
|
r-prettydoc
|
|
r-rmarkdown
|
|
r-testthat
|
|
)
|
|
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
|
|
sha256sums=('6d586a82c5df930da38f723a6a8a4e883a05650aa9dbed51bf74451fb6df101e')
|
|
|
|
build() {
|
|
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
|
|
}
|
|
|
|
package() {
|
|
install -dm0755 "${pkgdir}/usr/lib/R/library"
|
|
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
|
|
}
|
|
# vim:set ts=2 sw=2 et:
|