mirror of
https://github.com/BioArchLinux/Packages.git
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45 lines
973 B
Bash
45 lines
973 B
Bash
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
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_pkgname=casper
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_pkgver=2.40.0
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pkgname=r-${_pkgname,,}
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pkgver=2.40.0
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pkgrel=1
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pkgdesc='Characterization of Alternative Splicing based on Paired-End Reads'
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arch=('x86_64')
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url="https://bioconductor.org/packages/${_pkgname}"
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license=('GPL')
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depends=(
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r
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r-biobase
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r-biocgenerics
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r-coda
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r-ebarrays
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r-gaga
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r-genomeinfodb
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r-genomicfeatures
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r-genomicranges
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r-gtools
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r-iranges
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r-limma
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r-rsamtools
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r-rtracklayer
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r-s4vectors
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r-sqldf
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r-vgam
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)
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optdepends=(
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r-parallel
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)
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source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
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sha256sums=('666061f470ad299f65098ea8f08532be11a5095819f742d98bcc3755d3780fb9')
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build() {
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R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
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}
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package() {
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install -dm0755 "${pkgdir}/usr/lib/R/library"
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cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
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}
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# vim:set ts=2 sw=2 et:
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