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45 lines
1 KiB
Bash
45 lines
1 KiB
Bash
# system requirements: C++11, GNU make
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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
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_pkgname=SAIGEgds
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_pkgver=2.0.1
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pkgname=r-${_pkgname,,}
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pkgver=2.0.1
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pkgrel=1
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pkgdesc='Scalable Implementation of Generalized mixed models using GDS files in Phenome-Wide Association Studies'
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arch=('x86_64')
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url="https://bioconductor.org/packages/${_pkgname}"
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license=('GPL')
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depends=(
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r
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r-gdsfmt
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r-rcpp
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r-rcpparmadillo
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r-rcppparallel
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r-seqarray
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)
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optdepends=(
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r-biocgenerics
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r-compquadform
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r-crayon
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r-ggmanh
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r-knitr
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r-markdown
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r-parallel
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r-rmarkdown
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r-runit
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r-snprelate
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r-survey
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)
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source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
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sha256sums=('da5b4cbcd4fc0a14905434f5d9c02efa194455803ec2035b9ca2a0d1b7773f6c')
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build() {
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R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
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}
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package() {
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install -dm0755 "${pkgdir}/usr/lib/R/library"
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cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
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}
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# vim:set ts=2 sw=2 et:
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