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28 lines
855 B
Bash
28 lines
855 B
Bash
# Maintainer: sukanka <su975853527 at gmail dot com>
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pkgname=taco
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pkgver=0.7.3
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pkgrel=1
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pkgdesc="Multi-sample transcriptome assembly from RNA-Seq"
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arch=('x86_64')
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url="https://tacorna.github.io/"
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license=('MIT')
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depends=('python' 'cython' 'python-numpy' 'python-pandas')
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makedepends=('python-setuptools' 'python-pip')
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source=("${pkgname}-${pkgver}.tar.gz::https://github.com/tacorna/taco/archive/refs/tags/v${pkgver}.tar.gz")
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sha256sums=('441499883e92462f14050f9e011c0c225950ab679c6bfa7ead5e4cb592b1f69b')
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prepare(){
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cd "$srcdir/${pkgname}-${pkgver}"
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sed -i 's|cythonize(cython_extensions)|cythonize(cython_extensions, compiler_directives={"language_level": 3})|' setup.py
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}
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build() {
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cd "$srcdir/${pkgname}-${pkgver}"
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python setup.py build
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}
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package() {
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cd "$srcdir/${pkgname}-${pkgver}"
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python setup.py install --root="$pkgdir" --optimize=1
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}
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