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46 lines
1 KiB
Bash
46 lines
1 KiB
Bash
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
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_pkgname=rTRM
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_pkgver=1.34.0
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pkgname=r-${_pkgname,,}
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pkgver=1.34.0
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pkgrel=1
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pkgdesc='Identification of Transcriptional Regulatory Modules from Protein-Protein Interaction Networks'
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arch=('any')
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url="https://bioconductor.org/packages/${_pkgname}"
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license=('GPL')
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depends=(
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r
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r-annotationdbi
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r-dbi
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r-igraph
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r-rsqlite
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)
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optdepends=(
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r-biocgenerics
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r-biocstyle
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r-biomart
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r-biostrings
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r-bsgenome.mmusculus.ucsc.mm8.masked
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r-ggplot2
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r-graph
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r-knitr
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r-motifdb
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r-org.hs.eg.db
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r-org.mm.eg.db
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r-pwmenrich
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r-rmarkdown
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r-runit
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)
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source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
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sha256sums=('89df1ab5173c41867085ebc8c5506554bbebe427622a5b3a1034653bda8d6f9e')
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build() {
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R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
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}
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package() {
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install -dm0755 "${pkgdir}/usr/lib/R/library"
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cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
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}
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# vim:set ts=2 sw=2 et:
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