Packages/BioArchLinux/r-arrow/PKGBUILD

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# Maintainer: Pekka Ristola <pekkarr [at] protonmail [dot] com>
# Contributor: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=arrow
_pkgver=19.0.1
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="Integration to 'Apache' 'Arrow'"
arch=(x86_64)
url="https://cran.r-project.org/package=$_pkgname"
license=(Apache)
depends=(
arrow
r-assertthat
r-bit64
r-glue
r-purrr
r-r6
r-rlang
r-tidyselect
r-vctrs
)
makedepends=(
r-cpp11
)
checkdepends=(
r-blob
r-curl
r-dplyr
r-hms
r-lubridate
r-reticulate
r-stringr
r-testthat
)
optdepends=(
r-blob
r-cli
r-curl
r-dbi
r-dbplyr
r-decor
r-distro
r-dplyr
r-duckdb
r-hms
r-jsonlite
r-knitr
r-lubridate
r-pillar
r-pkgload
r-reticulate
r-rmarkdown
r-stringi
r-stringr
r-sys
r-testthat
r-tibble
r-tzdb
r-withr
)
source=("https://cran.r-project.org/src/contrib/${_pkgname}_${_pkgver}.tar.gz"
"fix-build.patch")
md5sums=('686db3adc866192b970ccd5877922d98'
'905a328d53b0b7591f769e07c29c3937')
b2sums=('0239b6148ad926eb5b2bb8431b73b97478140de018cd71b2b8eaa8f0db8bd5cd2064e5f7e043302202c9920b01951b8d6b84c90423a4ac0bc833bfb12e3c14d9'
'6feffc1a3ff38014a9f644de778f0056f0f48787ce9a4d40bff8d27d8e42df2b05f258638150cadbd5b1a18d4697f35bf07cb8d9a78ba6357b8d94ef9d714874')
prepare() {
# fix build with system arrow, skip failing tests
patch -Np1 -i fix-build.patch
}
build() {
mkdir build
R CMD INSTALL -l build "$_pkgname" \
--configure-vars=ARROW_R_ALLOW_CPP_VERSION_MISMATCH=true
}
check() {
cd "$_pkgname/tests"
R_LIBS="$srcdir/build" NOT_CRAN=true Rscript --vanilla testthat.R
}
package() {
install -d "$pkgdir/usr/lib/R/library"
cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}