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45 lines
999 B
Bash
45 lines
999 B
Bash
# system requirements: Java version >= 1.7, Pandoc
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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
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_pkgname=CHRONOS
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_pkgver=1.34.0
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pkgname=r-${_pkgname,,}
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pkgver=1.34.0
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pkgrel=1
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pkgdesc='CHRONOS: A time-varying method for microRNA-mediated sub-pathway enrichment analysis'
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arch=('any')
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url="https://bioconductor.org/packages/${_pkgname}"
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license=('GPL')
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depends=(
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r
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r-biomart
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r-circlize
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r-doparallel
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r-foreach
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r-graph
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r-igraph
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r-openxlsx
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r-rbgl
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r-rcurl
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r-rjava
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r-xml
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pandoc
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)
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optdepends=(
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r-biocgenerics
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r-knitr
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r-rmarkdown
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r-runit
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)
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source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
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sha256sums=('193e6b23247662609380189c3a15bcdf87f1dd997a644fc72fe8d934692f3961')
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build() {
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R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
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}
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package() {
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install -dm0755 "${pkgdir}/usr/lib/R/library"
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cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
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}
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# vim:set ts=2 sw=2 et:
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