mirror of
https://github.com/BioArchLinux/Packages.git
synced 2025-03-10 12:02:42 +00:00
41 lines
1.1 KiB
Bash
41 lines
1.1 KiB
Bash
# Maintainer: Christian Krause ("wookietreiber") <kizkizzbangbang@googlemail.com>
|
|
|
|
pkgname=raxml
|
|
pkgver=8.2.12
|
|
pkgrel=2
|
|
pkgdesc="Randomized Axelerated Maximum Likelihood"
|
|
arch=('x86_64')
|
|
url="http://sco.h-its.org/exelixis/web/software/raxml/"
|
|
license=('GPL3')
|
|
depends=('bash' 'perl')
|
|
conflicts=(raxml-mpi)
|
|
install='raxml.install'
|
|
source=("$pkgname-$pkgver.tar.gz::https://github.com/stamatak/standard-RAxML/archive/v$pkgver.tar.gz"
|
|
'raxml.install')
|
|
sha256sums=('338f81b52b54e16090e193daf36c1d4baa9b902705cfdc7f4497e3e09718533b'
|
|
'c908ecbcfd6323e0b05a19037f96904a9b379ae0a9934ade839210095bb49caf')
|
|
|
|
build() {
|
|
cd standard-RAxML-$pkgver
|
|
|
|
for _f in $(ls Makefile*gcc | grep -vE "HYBRID|MPI") ; do
|
|
rm -f *.o
|
|
make -f $_f || true
|
|
done
|
|
}
|
|
|
|
package() {
|
|
cd standard-RAxML-$pkgver
|
|
|
|
for _f in raxml* ; do
|
|
install -Dm755 $_f "$pkgdir"/usr/bin/$(basename $_f)
|
|
done
|
|
|
|
for _perlscript in usefulScripts/*.pl ; do
|
|
install -Dm755 $_perlscript "$pkgdir"/usr/bin/$(basename $_perlscript .pl)
|
|
done
|
|
|
|
for _shellscript in usefulScripts/*.sh ; do
|
|
install -Dm755 $_shellscript "$pkgdir"/usr/bin/$(basename $_shellscript .sh)
|
|
done
|
|
}
|