mirror of
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53 lines
1.1 KiB
Bash
53 lines
1.1 KiB
Bash
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
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_pkgname=affycoretools
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_pkgver=1.78.0
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pkgname=r-${_pkgname,,}
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pkgver=1.78.0
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pkgrel=1
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pkgdesc='Functions useful for those doing repetitive analyses with Affymetrix GeneChips'
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arch=('any')
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url="https://bioconductor.org/packages/${_pkgname}"
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license=('Artistic2.0')
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depends=(
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r
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r-affy
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r-annotationdbi
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r-biobase
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r-biocgenerics
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r-dbi
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r-edger
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r-gcrma
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r-ggplot2
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r-glimma
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r-gostats
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r-gplots
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r-hwriter
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r-limma
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r-oligoclasses
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r-reportingtools
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r-rsqlite
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r-s4vectors
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r-xtable
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)
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optdepends=(
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r-affydata
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r-biocstyle
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r-hgfocuscdf
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r-hgu95av2.db
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r-knitr
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r-rgl
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r-rmarkdown
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)
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source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
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sha256sums=('2e1301a50c2bae6527a5cbbe23676bf35490d0b860e55285c438eb6b24b7caf7')
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build() {
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R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
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}
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package() {
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install -dm0755 "${pkgdir}/usr/lib/R/library"
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cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
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}
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# vim:set ts=2 sw=2 et:
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