mirror of
https://github.com/BioArchLinux/Packages.git
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60 lines
1 KiB
Bash
60 lines
1 KiB
Bash
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
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_pkgname=ALPS
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_pkgver=1.0.8
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pkgname=r-${_pkgname,,}
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pkgver=${_pkgver//[:-]/.}
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pkgrel=1
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pkgdesc='AnaLysis routines for ePigenomicS data'
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arch=('any')
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url="https://bioconductor.org/packages/${_pkgname}"
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license=('MIT')
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depends=(
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r
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r-asserthat
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r-biocparallel
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r-chipseeker
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r-corrplot
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r-data.table
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r-dplyr
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r-genomicranges
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r-ggally
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r-genefilter
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r-gghalves
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r-ggplot2
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r-ggseqlogo
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r-gviz
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r-magrittr
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r-org.hs.eg.db
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r-plyr
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r-reshape2
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r-rtracklayer
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r-stringr
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r-tibble
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r-txdb.hsapiens.ucsc.hg38.knowngene
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)
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optdepends=(
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r-rmarkdown
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r-knitr
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r-complexheatmap
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r-circlize
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r-testthat
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)
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makedepends=(
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git
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tar
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)
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source=("git+https://git.bioconductor.org/packages/${_pkgname}.git")
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sha256sums=('SKIP')
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build() {
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tar -zcvf ${_pkgname}.tar.gz ${_pkgname}
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R CMD INSTALL ${_pkgname}.tar.gz -l "${srcdir}"
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}
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package() {
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install -dm0755 "${pkgdir}/usr/lib/R/library"
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cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
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}
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# vim:set ts=2 sw=2 et:
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