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43 lines
992 B
Bash
43 lines
992 B
Bash
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
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_pkgname=biomaRt
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_pkgver=2.62.0
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pkgname=r-${_pkgname,,}
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pkgver=${_pkgver//-/.}
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pkgrel=1
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pkgdesc="Interface to BioMart databases (i.e. Ensembl)"
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arch=(any)
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url="https://bioconductor.org/packages/$_pkgname"
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license=('Artistic-2.0')
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depends=(
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r-annotationdbi
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r-biocfilecache
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r-curl
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r-digest
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r-httr2
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r-progress
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r-rappdirs
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r-stringr
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r-xml2
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)
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optdepends=(
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r-biocstyle
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r-httptest2
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r-knitr
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r-mockery
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r-rmarkdown
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r-testthat
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)
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source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
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md5sums=('405174e4e9aaafe96f14c5c3f4d43dcb')
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b2sums=('67acfde8ec517e8d1d0b84b223cdf079da068d8e928a9e206297c755440a5c573bbbaee44fefcdb0564ff5fb0bd7aaa6ba100d1822eba87b61f2c4dab5f7afba')
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build() {
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mkdir build
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R CMD INSTALL -l build "$_pkgname"
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}
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package() {
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install -d "$pkgdir/usr/lib/R/library"
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cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
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}
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