mirror of
https://github.com/BioArchLinux/Packages.git
synced 2025-03-10 12:02:42 +00:00
62 lines
1.3 KiB
Bash
62 lines
1.3 KiB
Bash
# Maintainer: Pekka Ristola <pekkarr [at] protonmail [dot] com>
|
|
|
|
_pkgname=CCPlotR
|
|
_pkgver=1.4.0
|
|
pkgname=r-${_pkgname,,}
|
|
pkgver=${_pkgver//-/.}
|
|
pkgrel=1
|
|
pkgdesc="Plots For Visualising Cell-Cell Interactions"
|
|
arch=(any)
|
|
url="https://bioconductor.org/packages/$_pkgname"
|
|
license=('MIT')
|
|
depends=(
|
|
r-circlize
|
|
r-complexheatmap
|
|
r-dplyr
|
|
r-forcats
|
|
r-ggbump
|
|
r-ggh4x
|
|
r-ggplot2
|
|
r-ggraph
|
|
r-ggtext
|
|
r-igraph
|
|
r-patchwork
|
|
r-plyr
|
|
r-rcolorbrewer
|
|
r-scales
|
|
r-scatterpie
|
|
r-stringr
|
|
r-tibble
|
|
r-tidyr
|
|
r-viridis
|
|
)
|
|
checkdepends=(
|
|
r-testthat
|
|
)
|
|
optdepends=(
|
|
r-biocstyle
|
|
r-knitr
|
|
r-rmarkdown
|
|
r-testthat
|
|
)
|
|
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
|
|
md5sums=('568a1409688bbdcbd8041e911f45147e')
|
|
b2sums=('7f924a651dd5d866cae8afb5ab136b5829cd48f70eaa7aae5b0759975d998cb2c401ed005a3aa43a3f320cc04b858e466efe264764a12687f6816ee738853494')
|
|
|
|
build() {
|
|
mkdir build
|
|
R CMD INSTALL -l build "$_pkgname"
|
|
}
|
|
|
|
check() {
|
|
cd "$_pkgname/tests"
|
|
R_LIBS="$srcdir/build" NOT_CRAN=true Rscript --vanilla testthat.R
|
|
}
|
|
|
|
package() {
|
|
install -d "$pkgdir/usr/lib/R/library"
|
|
cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
|
|
|
|
install -d "$pkgdir/usr/share/licenses/$pkgname"
|
|
ln -s "/usr/lib/R/library/$_pkgname/LICENSE" "$pkgdir/usr/share/licenses/$pkgname"
|
|
}
|