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29 lines
892 B
Bash
29 lines
892 B
Bash
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
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_pkgname=DMRforPairs
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_pkgver=1.35.0
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pkgname=r-${_pkgname,,}
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pkgver=${_pkgver//-/.}
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pkgrel=3
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pkgdesc="identifying Differentially Methylated Regions between unique samples using array based methylation profiles"
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arch=(any)
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url="https://bioconductor.org/packages/$_pkgname"
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license=('GPL-2.0-or-later')
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depends=(
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r-genomicranges
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r-gviz
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r-r2html
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)
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source=("https://bioconductor.org/packages/3.17/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
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md5sums=('692e267e169e89a0bc8df8f91e433bbb')
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b2sums=('10f56ae566377958bcdf9f7c80ae1182d94ee9af43304f7a16314850de0a85b8df5e928ba4b33f997802565ca07c11dc5461fb74574d784fec935e43f9e4eba9')
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build() {
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mkdir build
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R CMD INSTALL -l build "$_pkgname"
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}
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package() {
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install -d "$pkgdir/usr/lib/R/library"
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cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
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}
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