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54 lines
1.1 KiB
Bash
54 lines
1.1 KiB
Bash
# Maintainer: Pekka Ristola <pekkarr [at] protonmail [dot] com>
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_pkgname=TSAR
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_pkgver=1.0.0
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pkgname=r-${_pkgname,,}
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pkgver=${_pkgver//-/.}
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pkgrel=2
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pkgdesc="Thermal Shift Analysis in R"
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arch=(any)
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url="https://bioconductor.org/packages/$_pkgname"
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license=('AGPL-3.0-only')
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depends=(
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r-dplyr
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r-ggplot2
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r-ggpubr
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r-jsonlite
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r-magrittr
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r-minpack.lm
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r-openxlsx
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r-plotly
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r-readxl
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r-rhandsontable
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r-shiny
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r-shinyjs
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r-shinywidgets
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r-stringr
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r-tidyr
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)
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checkdepends=(
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r-testthat
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)
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optdepends=(
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r-knitr
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r-rmarkdown
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r-testthat
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)
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source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
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md5sums=('7cc8589151c5b03e247590bbd7dc04dd')
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b2sums=('d9205a69412876f57d55f9f9d30d6133eb296b132b104bcdf2622e9c57018c063c5ba09b3d545444021a19c8650bffc86464595e888dd148a7f8bfa3c6b92e8d')
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build() {
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mkdir build
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R CMD INSTALL -l build "$_pkgname"
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}
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check() {
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cd "$_pkgname/tests"
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R_LIBS="$srcdir/build" NOT_CRAN=true Rscript --vanilla testthat.R
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}
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package() {
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install -d "$pkgdir/usr/lib/R/library"
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cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
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}
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