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48 lines
1 KiB
Bash
48 lines
1 KiB
Bash
# Maintainer: Pekka Ristola <pekkarr [at] protonmail [dot] com>
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_pkgname=alakazam
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_pkgver=1.3.0
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pkgname=r-${_pkgname,,}
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pkgver=${_pkgver//-/.}
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pkgrel=2
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pkgdesc="Immunoglobulin Clonal Lineage and Diversity Analysis"
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arch=(x86_64)
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url="https://cran.r-project.org/package=$_pkgname"
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license=('AGPL-3.0-only')
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depends=(
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r-airr
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r-ape
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r-biostrings
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r-dplyr
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r-genomicalignments
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r-ggplot2
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r-igraph
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r-iranges
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r-progress
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r-rcpp
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r-readr
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r-rlang
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r-scales
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r-seqinr
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r-stringi
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r-tibble
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r-tidyr
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)
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optdepends=(
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r-knitr
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r-rmarkdown
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r-testthat
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)
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source=("https://cran.r-project.org/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
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md5sums=('aef6659ef46836fe6b03da34625261b2')
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b2sums=('d5de753de4046f903f0cefed9963de44392dd22ff56f5cd7a84657891e1abc1f779a294bb13348bee28bfccc4aacf5d4666a14be8d41ac13210667f62b24e2ac')
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build() {
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mkdir build
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R CMD INSTALL -l build "$_pkgname"
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}
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package() {
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install -d "$pkgdir/usr/lib/R/library"
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cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
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}
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