mirror of
https://github.com/BioArchLinux/Packages.git
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44 lines
916 B
Bash
44 lines
916 B
Bash
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
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_pkgname=GEOquery
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_pkgver=2.72.0
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pkgname=r-${_pkgname,,}
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pkgver=2.72.0
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pkgrel=1
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pkgdesc='Get data from NCBI Gene Expression Omnibus (GEO)'
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arch=('any')
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url="https://bioconductor.org/packages/${_pkgname}"
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license=('GPL')
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depends=(
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r
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r-biobase
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r-curl
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r-data.table
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r-dplyr
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r-limma
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r-magrittr
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r-r.utils
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r-readr
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r-tidyr
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r-xml2
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)
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optdepends=(
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r-biocgenerics
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r-covr
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r-knitr
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r-markdown
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r-rmarkdown
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r-testthat
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)
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source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
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sha256sums=('f4da8a7d18af93bd6916f7509c2faaab06792a3c796cc83d327a40444bda1e67')
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build() {
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R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
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}
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package() {
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install -dm0755 "${pkgdir}/usr/lib/R/library"
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cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
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}
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# vim:set ts=2 sw=2 et:
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