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https://github.com/BioArchLinux/Packages.git
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38 lines
959 B
Bash
38 lines
959 B
Bash
# Maintainer: Pekka Ristola <pekkarr [at] protonmail [dot] com>
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_pkgname=Rvisdiff
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_pkgver=1.4.0
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pkgname=r-${_pkgname,,}
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pkgver=${_pkgver//-/.}
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pkgrel=1
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pkgdesc="Interactive Graphs for Differential Expression"
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arch=(any)
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url="https://bioconductor.org/packages/$_pkgname"
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license=('GPL-2.0-only OR GPL-3.0-only')
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depends=(
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r-edger
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)
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optdepends=(
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r-airway
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r-biocmanager
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r-biocstyle
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r-deseq2
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r-knitr
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r-limma
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r-matrixtests
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r-rmarkdown
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r-summarizedexperiment
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)
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source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
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md5sums=('4ba986d27d98c2d83005b9e6d69c0f32')
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b2sums=('d639607c1d76fb529f4788876577dfbb396bc3d12402079a4341a986e6ba9edd611c9655fe8bcd4d23ad87a0f7d3446eae8270b7907fcd0850a7110d9c4991d1')
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build() {
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mkdir build
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R CMD INSTALL -l build "$_pkgname"
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}
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package() {
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install -d "$pkgdir/usr/lib/R/library"
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cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
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}
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